RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ADAM32Q8TC27 787 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 PARD3BQ8TEW8 1205 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 CEP295NLQ96MC4 621 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 TTLL2Q9BWV7 592 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 DPEP3Q9H4B8 488 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 CAPN10Q9HC96 672 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 TMEM30AQ9NV96 361 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 DMAC2Q9NW81 257 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 ZDHHC9Q9Y397 364 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 HELZP42694 1942 aaKnown RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 PLXNB3Q9ULL4 1909 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 LRRIQ3A6PVS8 624 aaPredicted RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 F8VP50 259 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 GJB3O75712 270 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 PTPN1P18031 435 aaKnown RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 HDCP19113 662 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 CMA1P23946 247 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 ATICP31939 592 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 CACNA2D1P54289 1103 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 SEC13P55735 322 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 TNNC1P63316 161 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 CLDN10P78369 228 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 TRPC3Q13507 836 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 KMT5BQ4FZB7 885 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 SPDYCQ5MJ68 293 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 LPCAT2Q7L5N7 544 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 SLC9A9Q8IVB4 645 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 TTC16Q8NEE8 873 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 OR2I1PQ8NGU4 316 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 GOLGA5Q8TBA6 731 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 SH3RF2Q8TEC5 729 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 TMEM174Q8WUU8 243 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 HNRNPLLQ8WVV9 542 aaKnown RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 ADAMTS14Q8WXS8 1223 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 ATP2A3Q93084 1043 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 SYAP1Q96A49 352 aaPredicted RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 EXOC4Q96A65 974 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 C8orf48Q96LL4 319 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 CAMK1GQ96NX5 476 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 KCTD10Q9H3F6 313 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 VRTNQ9H8Y1 702 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 EXOC1Q9NV70 894 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 NXF1Q9UBU9 619 aaKnown RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 SLC6A14Q9UN76 642 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 HPSEQ9Y251 543 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
TDP1-212ENST00000555565 PCDH15Q96QU1 1955 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 PI4KAP42356 2102 aa11.5□□□□□ -0.57
TDP1-212ENST00000555565 APC2O95996 2303 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 MYOFQ9NZM1 2061 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 A0A0A0MRY4 1105 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 A8MXQ7 604 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 SGK1O00141 431 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 CLDN5O00501 218 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 TRIM66O15016 1216 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ADAM23O75077 832 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 PHACTR2O75167 634 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 VNN1O95497 513 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 C4BPAP04003 597 aaKnown RBP11.49□□□□□ -0.57
TDP1-212ENST00000555565 SERPINF2P08697 491 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 TCF3P15923 654 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ANXA13P27216 316 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 HOXD12P35452 270 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 CDH8P55286 799 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 NOP14P78316 857 aaKnown RBP11.49□□□□□ -0.57
TDP1-212ENST00000555565 DLG4P78352 724 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 MRPS21P82921 87 aaKnown RBP11.49□□□□□ -0.57
TDP1-212ENST00000555565 BIRC3Q13489 604 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 KCNB1Q14721 858 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ALLCQ8N6M5 410 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 PNPLA1Q8N8W4 532 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 IL17RCQ8NAC3 791 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 B3GALNT2Q8NCR0 500 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 CCDC26Q8TAB7 109 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 MDM1Q8TC05 714 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 SPATA32Q96LK8 384 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 B3GNT5Q9BYG0 378 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 SMYD3Q9H7B4 428 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
TDP1-212ENST00000555565 TRPM5Q9NZQ8 1165 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 USP25Q9UHP3 1055 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ARHGAP26Q9UNA1 814 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ASXL3Q9C0F0 2248 aa11.49□□□□□ -0.57
TDP1-212ENST00000555565 ZNF840PA6NDX5 716 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 CYSRT1A8MQ03 144 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 PDXKO00764 312 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 SH3BP5O60239 455 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
TDP1-212ENST00000555565 MYL1P05976 194 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 PFKLP17858 780 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 RDXP35241 583 aaKnown RBP11.48□□□□□ -0.57
TDP1-212ENST00000555565 KIR2DL1P43626 348 aaPredicted RBP11.48□□□□□ -0.57
TDP1-212ENST00000555565 SLC6A11P48066 632 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 IFNAR2P48551 515 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 NDUFA8P51970 172 aa11.48□□□□□ -0.57
TDP1-212ENST00000555565 AP3M2P53677 418 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms