RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TXNRD3NBQ6F5E7 133 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 PM20D1Q6GTS8 502 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 DENND5BQ6ZUT9 1274 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.69□□□□□ -0.7
SRP54-208ENST00000555557 FNIP1Q8TF40 1166 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 EDEM1Q92611 657 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 ALG3Q92685 438 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 CAPZA3Q96KX2 299 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 KLHL5Q96PQ7 755 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 OSBPL9Q96SU4 736 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 C11orf84Q9BUA3 381 aaPredicted RBP10.69□□□□□ -0.7
SRP54-208ENST00000555557 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.69□□□□□ -0.7
SRP54-208ENST00000555557 STK39Q9UEW8 545 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 MAGED2Q9UNF1 606 aaPredicted RBP10.69□□□□□ -0.7
SRP54-208ENST00000555557 NAALADL1Q9UQQ1 740 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 LZTS1Q9Y250 596 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 CHD9Q3L8U1 2897 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 PTPRDP23468 1912 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 MYO7AQ13402 2215 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 C2orf71A6NGG8 1288 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 TGM5O43548 720 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 HSF2BPO75031 334 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 LRCH4O75427 683 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 RB1P06400 928 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 KLRC2P26717 231 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 SDC4P31431 198 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 SLC1A1P43005 524 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 TUFMP49411 452 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 BSPRYQ5W0U4 402 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 TPGS2Q68CL5 300 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 AADACL2Q6P093 401 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 MRPL43Q8N983 215 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 ARNTL2Q8WYA1 636 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 MS4A14Q96JA4 679 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 POPDC2Q9HBU9 364 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.68□□□□□ -0.71e-7■□□□□ 8.7
SRP54-208ENST00000555557 SMARCAL1Q9NZC9 954 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 EHD2Q9NZN4 543 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 CALCOCO1Q9P1Z2 691 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 PCSK1NQ9UHG2 260 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 SSX2IPQ9Y2D8 614 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 PLXNA4Q9HCM2 1894 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 SYNJ2BP-COX16A0A087WUM0 186 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 PRRG1O14668 218 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 CAPN9O14815 690 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 LTFP02788 710 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 NCAM1P13591 858 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 YWHAQP27348 245 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 IL1R2P27930 398 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 ELF1P32519 619 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 SCNN1AP37088 669 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 MATKP42679 507 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 PEX5P50542 639 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 ERVK-21P61565 698 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 RPL10AP62906 217 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 ZNF211Q13398 564 aaPredicted RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 GPM6BQ13491 265 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 SMC1AQ14683 1233 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 LLGL1Q15334 1064 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 DCAF12L1Q5VU92 463 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 PPP2R2DQ66LE6 453 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 MTERF4Q7Z6M4 381 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 SCD5Q86SK9 330 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 NIPA2Q8N8Q9 360 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 ADAM32Q8TC27 787 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 FAM172AQ8WUF8 416 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 ACSF2Q96CM8 615 aaPredicted RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 TBCBQ99426 244 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 CNPY3Q9BT09 278 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 DDX23Q9BUQ8 820 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 NMUR1Q9HB89 426 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 NGRNQ9NPE2 291 aaKnown RBP10.68□□□□□ -0.7
SRP54-208ENST00000555557 KLHL11Q9NVR0 708 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 ASNSD1Q9NWL6 643 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 OSER1Q9NX31 292 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 COX16Q9P0S2 106 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 NUDT5Q9UKK9 219 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 PRDM4Q9UKN5 801 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 MRFAP1Q9Y605 127 aa10.68□□□□□ -0.7
SRP54-208ENST00000555557 A0A1W2PQH9 124 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 SLC38A8A6NNN8 435 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 H3BNC9 293 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 DAB1O75553 588 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 RNF8O76064 485 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 MIPP30301 263 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 MAN1A1P33908 653 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 CTNNA1P35221 906 aaKnown RBP10.67□□□□□ -0.7
SRP54-208ENST00000555557 YWHAGP61981 247 aaKnown RBP eCLIP10.67□□□□□ -0.7
SRP54-208ENST00000555557 UBE3AQ05086 875 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 TWF1Q12792 350 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 TAF10Q12962 218 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 SMTNL2Q2TAL5 461 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 KCNT1Q5JUK3 1230 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 SCYL2Q6P3W7 929 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 GPR65Q8IYL9 337 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 TDHQ8IZJ6 230 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 IRGQQ8WZA9 623 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 SPATA17Q96L03 361 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 SLC2A13Q96QE2 648 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms