RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NEU2Q9Y3R4 380 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 MYO5CQ9NQX4 1742 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 GPATCH8Q9UKJ3 1502 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 A0A0G2JLW4 131 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 IFNA16P05015 189 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 STAG3L1P0CL83 205 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PSMB9P28065 219 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 NPEPPSP55786 919 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ARF3P61204 181 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ARF1P84077 181 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 STAT4Q14765 748 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SLFNL1Q499Z3 407 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 FAM20CQ8IXL6 584 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SLC35G2Q8TBE7 412 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PDGFCQ9NRA1 345 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 DDIT4Q9NX09 232 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SHOC2Q9UQ13 582 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PRKAB1Q9Y478 270 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 MYH7P12883 1935 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 MOXD2PA6NHM9 499 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 DNALI1O14645 258 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF862O60290 1169 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 HOXA7P31268 230 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CEBPGP53567 150 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 BYSLQ13895 437 aaKnown RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ERMARDQ5T6L9 678 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PPP1R18Q6NYC8 613 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 RFFLQ8WZ73 363 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 MTO1Q9Y2Z2 717 aaKnown RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 LOC100653049A0A140TA62 436 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ERI2A8K979 691 aaKnown RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PHF2O75151 1096 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TSPAN9O75954 239 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 KRT34O76011 436 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 MCAMP43121 646 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 DDR2Q16832 855 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 LLGL2Q6P1M3 1020 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 FAM171BQ6P995 826 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CNPPD1Q9BV87 410 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 VAV3Q9UKW4 847 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PPP2R3BQ9Y5P8 575 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 MROH7-TTC4A0A0A0MT08 1334 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PITPNM2Q9BZ72 1349 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 HS6ST1O60243 411 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CTSEP14091 401 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PIK3R1P27986 724 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 HPCAL1P37235 193 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ACADSBP45954 432 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 HUNKP57058 714 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 C1DQ13901 141 aaKnown RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 FAM83EQ2M2I3 478 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CTXN3Q4LDR2 81 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 C3orf62Q6ZUJ4 267 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ATP8B1O43520 1251 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PLA2G6O60733 806 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TDP2O95551 362 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 EGFRP00533 1210 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 SCP2P22307 547 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 EMILIN2Q9BXX0 1053 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 EVA1BQ9NVM1 165 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 THG1LQ9NWX6 298 aaKnown RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 DPP3Q9NY33 737 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 KLHL3Q9UH77 587 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TBKBP1A7MCY6 615 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 IGF2BP3O00425 579 aaKnown RBP eCLIP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TSPAN3O60637 253 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CYP21A2P08686 494 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CYP2C19P33261 490 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 EFCAB12Q6NXP0 572 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CASP12Q6UXS9 341 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 DNAJC14Q6Y2X3 702 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TMEM26Q6ZUK4 368 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 SYDE1Q6ZW31 735 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CBWD2Q8IUF1 395 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TRPV3Q8NET8 790 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 KLC4Q9NSK0 619 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CHKBQ9Y259 395 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CDC42BPGQ6DT37 1551 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 MAGEB2O15479 319 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CD2BP2O95400 341 aaKnown RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 MYL12AP19105 171 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 IL5RAQ01344 420 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 RAPSNQ13702 412 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 SNRNP35Q16560 246 aaKnown RBP7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ATP6AP1LQ52LC2 224 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 SUSD4Q5VX71 490 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ARMC3Q5W041 872 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 TBC1D10CQ8IV04 446 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 GAL3ST3Q96A11 431 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ACTR8Q9H981 624 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 GJB4Q9NTQ9 266 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CMTM6Q9NX76 183 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 ANKARQ7Z5J8 1434 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 CENPXA8MT69 81 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 EXTL3O43909 919 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PRMT3O60678 531 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 SLC2A3P11169 496 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 PTGER2P43116 358 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 RAP1GAPP47736 663 aa7.09□□□□□ -1.27
SYNE2-216ENST00000555002 NUDT12Q9BQG2 462 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms