RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DDX50Q9BQ39 737 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 PDCD2LQ9BRP1 358 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 TTLL2Q9BWV7 592 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 FTHL17Q9BXU8 183 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 TXLNGYQ9BZA5 131 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ZCWPW1Q9H0M4 648 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ACTR10Q9NZ32 417 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 FAM153AQ9UHL3 310 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 PATJQ8NI35 1801 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 BDP1A6H8Y1 2624 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ADGRA3Q8IWK6 1321 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 COL1A2P08123 1366 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 PTPDC1A2A3K4 754 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 FOXO6A8MYZ6 492 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 RSPH10B2B2RC85 870 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 HIP1O00291 1037 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 E2F3O00716 465 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 NEMP1O14524 444 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 GNB5O14775 395 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 RNGTTO60942 597 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ATP6V1G1O75348 118 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 PRDM1O75626 825 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SNUPNO95149 360 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 CAVIN2O95810 425 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 RSPH10BP0C881 870 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SMIM10L2AP0DMW4 78 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SMIM10L2BP0DMW5 78 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 IL9P15248 144 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF3P17036 446 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 UBA1P22314 1058 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ANXA13P27216 316 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 CCND2P30279 289 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SOX6P35712 828 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 GNL1P36915 607 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 NBL1P41271 181 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 PRIM2P49643 509 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ETV1P50549 477 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SLC26A5P58743 744 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ARPC4P59998 168 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SH3BP2P78314 561 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 CYP4F8P98187 520 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 GPM6BQ13491 265 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 GAS6Q14393 721 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF460Q14592 562 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 GRM4Q14833 912 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 EML3Q32P44 896 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 HSP90AA5PQ58FG0 334 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 TCEAL5Q5H9L2 206 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 PCNX4Q63HM2 1172 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 JMJD6Q6NYC1 403 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 FBXL19Q6PCT2 694 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 METTL7BQ6UX53 244 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 C6orf15Q6UXA7 325 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF600Q6ZNG1 722 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 IKBIPQ70UQ0 350 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 MARK2Q7KZI7 788 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ADGRF4Q8IZF3 695 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 RNF10Q8N5U6 811 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 PCYOX1LQ8NBM8 494 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SMRP1Q8NCR6 262 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 FBXO30Q8TB52 745 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 KCNG4Q8TDN1 519 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 RAPGEF5Q92565 580 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 COPS5Q92905 334 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 RILPL2Q969X0 211 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 FAXDC2Q96IV6 333 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 VPS50Q96JG6 964 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 TAAR1Q96RJ0 339 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 TUBA1CQ9BQE3 449 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 AMNQ9BXJ7 453 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ACPTQ9BZG2 426 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 FTOQ9C0B1 505 aaKnown RBP eCLIP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 TRIT1Q9H3H1 467 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 SYNDIG1Q9H7V2 258 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 JMJD4Q9H9V9 463 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 UBN1Q9NPG3 1134 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 CD93Q9NPY3 652 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC177Q9NQR7 707 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 CD207Q9UJ71 328 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 TRAF3IP3Q9Y228 551 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 ZFP37Q9Y6Q3 630 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 NFASCO94856 1347 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 NRCAMQ92823 1304 aa2.86□□□□□ -1.95
PRPF39-206ENST00000554429 MTCL1Q9Y4B5 1905 aaKnown RBP2.86□□□□□ -1.95
PRPF39-206ENST00000554429 A0A087WWV3 80 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 IGKV6D-21A0A0A0MT36 114 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PGPEP1LA6NFU8 196 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC169A6NNP5 214 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 NUDT19A8MXV4 375 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 IKBKBO14920 756 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ZBTB5O15062 677 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 KPNA5O15131 536 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CETN3O15182 167 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 AP1G1O43747 822 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 DYRK3O43781 588 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TSPAN1O60635 241 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ENDOD1O94919 500 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 FBXO21O94952 628 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CAPNS1P04632 268 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 LGALS2P05162 132 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms