RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 NR1I3Q14994 352 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 PMF1Q6P1K2 205 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 GPRIN1Q7Z2K8 1008 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 TMEM110Q86TL2 294 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 LUZP1Q86V48 1076 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 ZNF677Q86XU0 584 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 SIX6OS1Q8N1H7 587 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 SECISBP2LQ93073 1101 aaKnown RBP9.82□□□□□ -0.84
CHD8-206ENST00000553870 PBXIP1Q96AQ6 731 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 RSPRY1Q96DX4 576 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 PCMTD1Q96MG8 357 aaPredicted RBP9.82□□□□□ -0.84
CHD8-206ENST00000553870 LRRC3BQ96PB8 259 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 NOX5Q96PH1 765 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 SLC22A12Q96S37 553 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 FAM83CQ9BQN1 747 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 SLC4A5Q9BY07 1137 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 EDEM3Q9BZQ6 932 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 RNF38Q9H0F5 515 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 GANQ9H2C0 597 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 C8orf33Q9H7E9 229 aaPredicted RBP9.82□□□□□ -0.84
CHD8-206ENST00000553870 C11orf16Q9NQ32 467 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD8-206ENST00000553870 TBC1D14Q9P2M4 693 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 DNMT3LQ9UJW3 386 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 MYO6Q9UM54 1294 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 FHOD1Q9Y613 1164 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 MUC3AQ02505 3323 aa9.82□□□□□ -0.84
CHD8-206ENST00000553870 MYH10P35580 1976 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ZNF638Q14966 1978 aaKnown RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 A0A1W2PQH9 124 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 F8VZ95 297 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 TULP2O00295 520 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ARNTLO00327 626 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 GABBR2O75899 941 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 CFHP08603 1231 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 MBL2P11226 248 aaPredicted RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 RARGP13631 454 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 CYP11B1P15538 503 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 SOX5P35711 763 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 STAT1P42224 750 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 JAM2P57087 298 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ZNF445P59923 1031 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 POLR2FP61218 127 aaKnown RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 COG7P83436 770 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 GOLGA8FQ08AF8 430 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 GOLGA8DPQ0D2H9 430 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 USP4Q13107 963 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 NR1H3Q13133 447 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 GRM2Q14416 872 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 MTF1Q14872 753 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ZNF77Q15935 545 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 BEND5Q7L4P6 421 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 SCD5Q86SK9 330 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 SIX5Q8N196 739 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 FBXL6Q8N531 539 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ST13P5Q8NFI4 369 aaPredicted RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 CSGALNACT1Q8TDX6 532 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 SH3RF2Q8TEC5 729 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 OSCP1Q8WVF1 389 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 OTUB2Q96DC9 234 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 IQCDQ96DY2 449 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 SPAG5Q96R06 1193 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 LRFN3Q9BTN0 628 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 DDX23Q9BUQ8 820 aaKnown RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 TRIM62Q9BVG3 475 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 NUP58Q9BVL2 599 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 OSBPL6Q9BZF3 934 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 NACA2Q9H009 215 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 MIS12Q9H081 205 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 SMOC2Q9H3U7 446 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 TSPY26PQ9H489 355 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ARHGEF3Q9NR81 526 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 GKN1Q9NS71 199 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ABCC13Q9NSE7 274 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 FAM207AQ9NSI2 230 aaPredicted RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 OLA1Q9NTK5 396 aaKnown RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 NAGPAQ9UK23 515 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 CCL26Q9Y258 94 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 MRPS17Q9Y2R5 130 aaKnown RBP9.81□□□□□ -0.84
CHD8-206ENST00000553870 CEP83Q9Y592 693 aa9.81□□□□□ -0.84
CHD8-206ENST00000553870 ANAPC1Q9H1A4 1944 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 TECTAO75443 2155 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 E2F8A0AVK6 867 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 KRBA1A5PL33 1030 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 LEFTY2O00292 366 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 TEX33O43247 280 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 LSM8O95777 96 aaKnown RBP9.8□□□□□ -0.84
CHD8-206ENST00000553870 TPM3P06753 285 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 CDH5P33151 784 aaPredicted RBP9.8□□□□□ -0.84
CHD8-206ENST00000553870 KPNA1P52294 538 aaPredicted RBP9.8□□□□□ -0.84
CHD8-206ENST00000553870 UBASH3AP57075 661 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 DAOAP59103 153 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 YWHAGP61981 247 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHD8-206ENST00000553870 FANCCQ00597 558 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 ADIGQ0VDE8 80 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 MLF2Q15773 248 aaPredicted RBP9.8□□□□□ -0.84
CHD8-206ENST00000553870 ITPRIPL2Q3MIP1 535 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 FIGNQ5HY92 759 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 BSPRYQ5W0U4 402 aa9.8□□□□□ -0.84
CHD8-206ENST00000553870 BTBD8Q5XKL5 378 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms