RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 MAP7D1Q3KQU3 841 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 SDHAF4Q5VUM1 108 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 LARP1BQ659C4 914 aaKnown RBP5.8□□□□□ -1.48
HOXB3-213ENST00000552000 LMBRD2Q68DH5 695 aaPredicted RBP5.8□□□□□ -1.48
HOXB3-213ENST00000552000 MPZL3Q6UWV2 235 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 SLCO6A1Q86UG4 719 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 MON1AQ86VX9 555 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 MARCH9Q86YJ5 346 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 SFTPA1Q8IWL2 248 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 EFCAB13Q8IY85 973 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 ALLCQ8N6M5 410 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 TXNDC5Q8NBS9 432 aaKnown RBP5.8□□□□□ -1.48
HOXB3-213ENST00000552000 CCDC26Q8TAB7 109 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 CEP76Q8TAP6 659 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 OSCP1Q8WVF1 389 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 MRPS31Q92665 395 aaKnown RBP5.8□□□□□ -1.48
HOXB3-213ENST00000552000 ATP2A3Q93084 1043 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 SENP8Q96LD8 212 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 MTMR9Q96QG7 549 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 UBL7Q96S82 380 aaPredicted RBP5.8□□□□□ -1.48
HOXB3-213ENST00000552000 LINC00597Q9H2U6 94 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 TRPC7Q9HCX4 862 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 HSFX1Q9UBD0 423 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 HCN2Q9UL51 889 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 MAGED2Q9UNF1 606 aaPredicted RBP5.8□□□□□ -1.48
HOXB3-213ENST00000552000 DOLKQ9UPQ8 538 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 POLQO75417 2590 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 MYLKQ15746 1914 aa5.8□□□□□ -1.48
HOXB3-213ENST00000552000 TCRBV21S2A2A0A5A6 115 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 SGK1O00141 431 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 SIN3BO75182 1162 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 TADA3O75528 432 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 GJB3O75712 270 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 CKMP06732 381 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 CLTAP09496 248 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 HAPLN1P10915 354 aaPredicted RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ODC1P11926 461 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 HOXD12P35452 270 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 KRT2P35908 639 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 MATR3P43243 847 aaKnown RBP eCLIP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 GPR15P49685 360 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 RPL6Q02878 288 aaKnown RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 FAM160A1Q05DH4 1040 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 CYP4F3Q08477 520 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 MESP2Q0VG99 397 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 BYSLQ13895 437 aaKnown RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ECM1Q16610 540 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ZC2HC1CQ53FD0 456 aaPredicted RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 BMP2KLQ5H9B9 411 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 SPDYCQ5MJ68 293 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 EMC10Q5UCC4 262 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 PEAR1Q5VY43 1037 aaPredicted RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ZNF605Q86T29 641 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 LRRTM3Q86VH5 581 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 SKAP1Q86WV1 359 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 NAXDQ8IW45 347 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 IL17RCQ8NAC3 791 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ERMNQ8TAM6 284 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 PIP4K2CQ8TBX8 421 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 SH3RF2Q8TEC5 729 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 TNFRSF25Q93038 417 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 TP53INP1Q96A56 240 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ZNF274Q96GC6 653 aaPredicted RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 SLC22A12Q96S37 553 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 CYP2S1Q96SQ9 504 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ZCWPW1Q9H0M4 648 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 BHMT2Q9H2M3 363 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 BRMS1Q9HCU9 246 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ZDHHC4Q9NPG8 344 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ABI2Q9NYB9 513 aaPredicted RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ZDHHC3Q9NYG2 299 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ARHGAP28Q9P2N2 729 aa5.79□□□□□ -1.48
HOXB3-213ENST00000552000 UBQLN1Q9UMX0 589 aaKnown RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 APOBEC2Q9Y235 224 aaKnown RBP5.79□□□□□ -1.48
HOXB3-213ENST00000552000 ICE1Q9Y2F5 2266 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 STK36Q9NRP7 1315 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 ITPR2Q14571 2701 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 C2CD3Q4AC94 2353 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 TRAV19A0A0A6YYK7 116 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 TTC26A0AVF1 554 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 TRABD2BA6NFA1 517 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 LACTBL1A8MY62 500 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 SLC16A4O15374 487 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 AP5Z1O43299 807 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 HIP1RO75146 1068 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 PRPF40AO75400 957 aaKnown RBP5.78□□□□□ -1.48
HOXB3-213ENST00000552000 CDC45O75419 566 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 CDKL5O76039 1030 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 NFATC1O95644 943 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 SYPP08247 313 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 USP17L7P0C7H9 530 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 CSH1P0DML2 217 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 CSH2P0DML3 217 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 CYP3A5P20815 502 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 RPA1P27694 616 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 MCM7P33993 719 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 CCT6AP40227 531 aaKnown RBP5.78□□□□□ -1.48
HOXB3-213ENST00000552000 ABCG1P45844 678 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 SLC6A11P48066 632 aa5.78□□□□□ -1.48
HOXB3-213ENST00000552000 LILRA4P59901 499 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms