RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PHTF2Q8N3S3 785 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 NDRG1Q92597 394 aaKnown RBP16.83■□□□□ 0.28
COX6A1-203ENST00000550009 HNRNPABQ99729 332 aaKnown RBP16.83■□□□□ 0.28
COX6A1-203ENST00000550009 RXFP3Q9NSD7 469 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 HCN2Q9UL51 889 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 SLC8A2Q9UPR5 921 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 PLXND1Q9Y4D7 1925 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 TULP2O00295 520 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 FAM200BP0CF97 657 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 P4HA1P13674 534 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 ACO1P21399 889 aaKnown RBP16.82■□□□□ 0.28
COX6A1-203ENST00000550009 RPL13P26373 211 aaKnown RBP16.82■□□□□ 0.28
COX6A1-203ENST00000550009 PPP3CCP48454 512 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 EDRF1Q3B7T1 1238 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 DCAF17Q5H9S7 520 aaPredicted RBP16.82■□□□□ 0.28
COX6A1-203ENST00000550009 LAIR1Q6GTX8 287 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 TMEM92Q6UXU6 159 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.82■□□□□ 0.28
COX6A1-203ENST00000550009 SCD5Q86SK9 330 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 TMEM25Q86YD3 366 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 ZC3H3Q8IXZ2 948 aaKnown RBP16.82■□□□□ 0.28
COX6A1-203ENST00000550009 SLC4A11Q8NBS3 891 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 SPATA20Q8TB22 786 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 USP33Q8TEY7 942 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 NT5C1AQ9BXI3 368 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 KLF16Q9BXK1 252 aaPredicted RBP16.82■□□□□ 0.28
COX6A1-203ENST00000550009 TPSD1Q9BZJ3 242 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 DLL3Q9NYJ7 618 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 GMEB2Q9UKD1 530 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 MAN1B1Q9UKM7 699 aa16.82■□□□□ 0.28
COX6A1-203ENST00000550009 TLR5O60602 858 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 KIF20AO95235 890 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 PFKLP17858 780 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 HOXA6P31267 233 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 TIE1P35590 1138 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 MXI1P50539 228 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 RAD23BP54727 409 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 SF3A2Q15428 464 aaKnown RBP16.81■□□□□ 0.28
COX6A1-203ENST00000550009 KRT39Q6A163 491 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 CEP68Q76N32 757 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 FRMD1Q8N878 549 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 PDZD8Q8NEN9 1154 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 GAB3Q8WWW8 586 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 OVCA2Q8WZ82 227 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
COX6A1-203ENST00000550009 CYP3A43Q9HB55 503 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 CISHQ9NSE2 258 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 RAB20Q9NX57 234 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 EHD2Q9NZN4 543 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 RAB23Q9ULC3 237 aa16.81■□□□□ 0.28
COX6A1-203ENST00000550009 CETN3O15182 167 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 RPP40O75818 363 aaKnown RBP16.8■□□□□ 0.28
COX6A1-203ENST00000550009 EPB41P11171 864 aaKnown RBP16.8■□□□□ 0.28
COX6A1-203ENST00000550009 ADH5P11766 374 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 PDE6CP51160 858 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 ATXN1P54253 815 aaKnown RBP16.8■□□□□ 0.28
COX6A1-203ENST00000550009 LRMPQ12912 555 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 NR1H3Q13133 447 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 BECN1Q14457 450 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 SMARCE1Q969G3 411 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 HEXIM2Q96MH2 286 aaKnown RBP16.8■□□□□ 0.28
COX6A1-203ENST00000550009 ARRDC1-AS1Q9H2J1 176 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 SEMA4GQ9NTN9 838 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 SCML2Q9UQR0 700 aa16.8■□□□□ 0.28
COX6A1-203ENST00000550009 E2F8A0AVK6 867 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 DCDC2BA2VCK2 349 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 SGK1O00141 431 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 BIN1O00499 593 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 RETP07949 1114 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 BCKDHBP21953 392 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 KIF11P52732 1056 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 AMPD2Q01433 879 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 KLHL10Q6JEL2 608 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 SYT13Q7L8C5 426 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 DGLUCYQ7Z3D6 616 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 TTC30AQ86WT1 665 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 MIB1Q86YT6 1006 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 ETFBKMTQ8IXQ9 262 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 TXNDC5Q8NBS9 432 aaKnown RBP16.79■□□□□ 0.28
COX6A1-203ENST00000550009 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 KAT5Q92993 513 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 BHMTQ93088 406 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 IMPG2Q9BZV3 1241 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 SH3BP1Q9Y3L3 701 aa16.79■□□□□ 0.28
COX6A1-203ENST00000550009 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 ADAM23O75077 832 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 ATG13O75143 517 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 KAT7O95251 611 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 KLF8O95600 359 aaPredicted RBP16.78■□□□□ 0.28
COX6A1-203ENST00000550009 CCDC192P0DO97 292 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 RARGP13631 454 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 GTF2H1P32780 548 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 KIR2DL1P43626 348 aaPredicted RBP16.78■□□□□ 0.28
COX6A1-203ENST00000550009 TUBP50607 506 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 DGKEP52429 567 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 NUCB2P80303 420 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 FBXO43Q4G163 708 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms