RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 BDNFP23560 247 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 IGFBP6P24592 240 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 GJC1P36383 396 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 GUCY2DQ02846 1103 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 CREMQ03060 361 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 GPR17Q13304 367 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 SIX1Q15475 284 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 TCTN1Q2MV58 587 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 USP41Q3LFD5 358 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 ERMARDQ5T6L9 678 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 MFSD7Q6UXD7 560 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 HDXQ7Z353 690 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 DEFB106AQ8N104 65 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 FAM71BQ8TC56 605 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 NTAN1Q96AB6 310 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 ZNF689Q96CS4 500 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 CFAP57Q96MR6 1250 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 NPY6RQ99463 290 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 TSPYL1Q9H0U9 437 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 AMACRQ9UHK6 382 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 DMGDHQ9UI17 866 aaKnown RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 MAFFQ9ULX9 164 aa13.12□□□□□ -0.31
CACNB3-212ENST00000549971 DRG1Q9Y295 367 aaKnown RBP13.12□□□□□ -0.31
CACNB3-212ENST00000549971 PIK3R2O00459 728 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 GRAP2O75791 330 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 BEST1O76090 585 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 EFEMP2O95967 443 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 GRIK1P39086 918 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 PSEN1P49768 467 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 SULT1E1P49888 294 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 HDAC4P56524 1084 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 WDR5P61964 334 aaKnown RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 GPS2Q13227 327 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 MTA1Q13330 715 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 KRT81Q14533 505 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 DPYSL2Q16555 572 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 ARL13BQ3SXY8 428 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 SLC39A12Q504Y0 691 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 BEND6Q5SZJ8 279 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 AADACL2Q6P093 401 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 LRRTM3Q86VH5 581 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 CCDC89Q8N998 374 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 CAVIN3Q969G5 261 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 ABHD8Q96I13 439 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 IGSF21Q96ID5 467 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 HERC2P3Q9BVR0 1158 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 VIPAS39Q9H9C1 493 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNB3-212ENST00000549971 PCSK1NQ9UHG2 260 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
CACNB3-212ENST00000549971 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 TRIM43BA6NCK2 446 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 C3orf70A6NLC5 250 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-212ENST00000549971 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 TTI1O43156 1089 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 TBC1D4O60343 1298 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 APOC2P02655 101 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 CSF2RAP15509 400 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 TGM2P21980 687 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 IL1R2P27930 398 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 ARSEP51690 589 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 CDH6P55285 790 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 ATP11AP98196 1134 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 CAV1Q03135 178 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 SCAPQ12770 1279 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 TAF5Q15542 800 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 CDO1Q16878 200 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 C15orf59Q2T9L4 293 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-212ENST00000549971 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-212ENST00000549971 SLC8B1Q6J4K2 584 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 SCYL2Q6P3W7 929 aa13.1□□□□□ -0.31
CACNB3-212ENST00000549971 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-212ENST00000549971 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms