RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 SLC35C1Q96A29 364 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 TMEM176AQ96HP8 235 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 HEXIM2Q96MH2 286 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 CEP63Q96MT8 703 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 NACA2Q9H009 215 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 CYLDQ9NQC7 956 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 ATG2BQ96BY7 2078 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 ADH1CP00326 375 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 ACO1P21399 889 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 EIF2DP41214 584 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 KIF11P52732 1056 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 RAD23BP54727 409 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 SIM2Q14190 667 aaPredicted RBP19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 HEATR6Q6AI08 1181 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 ISM2Q6H9L7 571 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 SYT13Q7L8C5 426 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 GPRIN1Q7Z2K8 1008 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 ACDQ96AP0 544 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 UBXN6Q9BZV1 441 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 GMEB2Q9UKD1 530 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 SH3BP1Q9Y3L3 701 aa19.68■□□□□ 0.74
CHMP1A-207ENST00000549328 PMM2O15305 246 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 CD44P16070 742 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 ATP5C1P36542 298 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 ID4P47928 161 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 PGFP49763 221 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 PSEN1P49768 467 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 KLHDC10Q6PID8 442 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 ZNF276Q8N554 614 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 SLC4A11Q8NBS3 891 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 RPLP0P6Q8NHW5 317 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 ARID3AQ99856 593 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 USP3Q9Y6I4 520 aa19.67■□□□□ 0.74
CHMP1A-207ENST00000549328 A0A0A0MRY4 1105 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 PPP1R3GB7ZBB8 358 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 K7EQS6 105 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 GADD45BO75293 160 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 RETP07949 1114 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 BMP6P22004 513 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 YWHAEP62258 255 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 CUL2Q13617 745 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 MORC3Q14149 939 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 ARHGAP17Q68EM7 881 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 TTI2Q6NXR4 508 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 PRR23BQ6ZRT6 265 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 HTR3DQ70Z44 454 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 CCDC186Q7Z3E2 898 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 JAKMIP2Q96AA8 810 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 PNKPQ96T60 521 aa19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 KLF16Q9BXK1 252 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-207ENST00000549328 BICDL2A1A5D9 508 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 SCAMP3O14828 347 aaKnown RBP19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 CYP26A1O43174 497 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 LRP3O75074 770 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 ADH5P11766 374 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 TBXAS1P24557 533 aaPredicted RBP19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 HOXC13P31276 330 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 FMO5P49326 533 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 GAD2Q05329 585 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 GOLGA8FQ08AF8 430 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 GOLGA8DPQ0D2H9 430 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 LY6G5CQ5SRR4 150 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 ANKRD52Q8NB46 1076 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 USP33Q8TEY7 942 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 OSER1Q9NX31 292 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 CLIC5Q9NZA1 410 aa19.65■□□□□ 0.74
CHMP1A-207ENST00000549328 A0A1W2PQH9 124 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 HOXC11O43248 304 aaPredicted RBP19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 TBX18O95935 607 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 TGM1P22735 817 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 SLC8A3P57103 927 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 MRPS21P82921 87 aaKnown RBP19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 SRSF5Q13243 272 aaKnown RBP19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 DMC1Q14565 340 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 KLHL10Q6JEL2 608 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 CEP68Q76N32 757 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 TADA2BQ86TJ2 420 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 BBS7Q8IWZ6 715 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 GAB3Q8WWW8 586 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 NELFBQ8WX92 580 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 CDK5RAP1Q96SZ6 601 aaKnown RBP19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 NMUR1Q9HB89 426 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 SPHK2Q9NRA0 654 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 EBF1Q9UH73 591 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 DNMT3LQ9UJW3 386 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 KIAA1257Q9ULG3 409 aa19.64■□□□□ 0.73
CHMP1A-207ENST00000549328 P4HA2O15460 535 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 GREM1O60565 184 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 APODP05090 189 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 RARGP13631 454 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 GRIA2P42262 883 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 PLA2G4AP47712 749 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 SLC6A11P48066 632 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 PXNP49023 591 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 FOXK2Q01167 660 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 CETN1Q12798 172 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 LPAL2Q16609 132 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 CCDC40Q4G0X9 1142 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms