RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 URGCPQ8TCY9 931 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 USP33Q8TEY7 942 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 VAT1Q99536 393 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 RGL1Q9NZL6 768 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 WHRNQ9P202 907 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CORO1CQ9ULV4 474 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 SMAD7O15105 426 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 GABBR2O75899 941 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 KRT18P05783 430 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 EIF2AK2P19525 551 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PTGIRP43119 386 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ETF1P62495 437 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TBC1D8BQ0IIM8 1120 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CETN1Q12798 172 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 EXOC3L4Q17RC7 722 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CDKL4Q5MAI5 379 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FBXO16Q8IX29 292 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 AOPEPQ8N6M6 819 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ANKRD13CQ8N6S4 541 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ZSWIM2Q8NEG5 633 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 MAP7D2Q96T17 732 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ZSWIM1Q9BR11 485 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CCDC94Q9BW85 323 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CEP44Q9C0F1 390 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ELOVL4Q9GZR5 314 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 DNAJC25Q9H1X3 360 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 POPDC3Q9HBV1 291 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 AJAP1Q9UKB5 411 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 DNPEPQ9ULA0 475 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 SLC27A6Q9Y2P4 619 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 STARD13Q9Y3M8 1113 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ST14Q9Y5Y6 855 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FOXO6A8MYZ6 492 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 H7C0S8 307 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 H2AFZP0C0S5 128 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 KLRC2P26717 231 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 ALDH7A1P49419 539 aaKnown RBP5.15□□□□□ -1.58
SCAF11-212ENST00000549162 GBX1Q14549 363 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 OASLQ15646 514 aaKnown RBP5.15□□□□□ -1.58
SCAF11-212ENST00000549162 SLC9C1Q4G0N8 1177 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 CLLU1OSQ5K130 101 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 KCTD11Q693B1 232 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 PTCRAQ6ISU1 281 aaPredicted RBP5.15□□□□□ -1.58
SCAF11-212ENST00000549162 RAD9BQ6WBX8 426 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 H2AFVQ71UI9 128 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF571Q7Z3V5 609 aaPredicted RBP5.15□□□□□ -1.58
SCAF11-212ENST00000549162 ANKS1BQ7Z6G8 1248 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 MTERF4Q7Z6M4 381 aaKnown RBP5.15□□□□□ -1.58
SCAF11-212ENST00000549162 RIBC1Q8N443 379 aaPredicted RBP5.15□□□□□ -1.58
SCAF11-212ENST00000549162 MYRIPQ8NFW9 859 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 RAB3IL1Q8TBN0 382 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 CENPTQ96BT3 561 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 B3GNT4Q9C0J1 378 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 SDCBP2Q9H190 292 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 RABGEF1Q9UJ41 708 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 SNX12Q9UMY4 172 aa5.15□□□□□ -1.58
SCAF11-212ENST00000549162 R3HCC1Q9Y3T6 440 aaKnown RBP5.15□□□□□ -1.58
SCAF11-212ENST00000549162 SMIM28A0A1B0GU29 152 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 RSPH10B2B2RC85 870 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CPNE3O75131 537 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 LRRN2O75325 713 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 F9P00740 461 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 OAS1P00973 400 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 ASGR1P07306 291 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CLTBP09497 229 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 RSPH10BP0C881 870 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CTSAP10619 480 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 ZFXP17010 805 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 ECHS1P30084 290 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CCND3P30281 292 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 HSPA9P38646 679 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 MAPKAPK2P49137 400 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 BCAT1P54687 386 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 WNT7BP56706 349 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF252P-AS1Q0IIN9 211 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 DDR2Q16832 855 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 SFMBT2Q5VUG0 894 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 NXPE4Q6UWF7 544 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 PPP1R21Q6ZMI0 780 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 LZTR1Q8N653 840 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 C7orf31Q8N865 590 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 GPR150Q8NGU9 434 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 OR6Y1Q8NGX8 325 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 MYO19Q96H55 970 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 ANKRD36BP1Q96IX9 119 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 MRPL47Q9HD33 250 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 PDGFCQ9NRA1 345 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 FBXO9Q9UK97 447 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 TICRRQ7Z2Z1 1910 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 MYADML2A6NDP7 307 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 FGF10O15520 208 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 PSMD3O43242 534 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 DXOO77932 396 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 MYCP01106 439 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 EPOP01588 193 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 GUSBP08236 651 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 MSNP26038 577 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 NUDT1P36639 197 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 SLC26A3P40879 764 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms