RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 FAF2Q96CS3 445 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 MAP3K20Q9NYL2 800 aaKnown RBP24.02■■□□□ 1.44
NPAS3-206ENST00000548645 TMOD2Q9NZR1 351 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 TMCO1Q9UM00 188 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 UBR3Q6ZT12 1888 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 A0A0B4J269 797 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 CYB561D2O14569 222 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 KRT38O76015 456 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 C1QAP02745 245 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 CD48P09326 243 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 CDH5P33151 784 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-206ENST00000548645 DARS2Q6PI48 645 aaKnown RBP24.02■■□□□ 1.44
NPAS3-206ENST00000548645 CPXCR1Q8N123 301 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 ARFGAP1Q8N6T3 406 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 JADE3Q92613 823 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 FRMD8Q9BZ67 464 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-206ENST00000548645 PHF24Q9UPV7 400 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 TRDMT1O14717 391 aaKnown RBP24.01■■□□□ 1.43
NPAS3-206ENST00000548645 CCNT2O60583 730 aaKnown RBP24.01■■□□□ 1.43
NPAS3-206ENST00000548645 CSDE1O75534 798 aaKnown RBP24.01■■□□□ 1.43
NPAS3-206ENST00000548645 BPGMP07738 259 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 POLR2BP30876 1174 aaKnown RBP24.01■■□□□ 1.43
NPAS3-206ENST00000548645 SLC26A7Q8TE54 656 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 THAP1Q9NVV9 213 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 TCP10L2B9ZVM9 353 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 AVILO75366 819 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 VCLP18206 1134 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 RPL26P61254 145 aaKnown RBP24.01■■□□□ 1.43
NPAS3-206ENST00000548645 SLC25A3Q00325 362 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 CBLBQ13191 982 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 SPATA24Q86W54 205 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 WDR75Q8IWA0 830 aaKnown RBP24.01■■□□□ 1.43
NPAS3-206ENST00000548645 FNIP1Q8TF40 1166 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 EBF4Q9BQW3 602 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 MSTO1Q9BUK6 570 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 HOMER2Q9NSB8 354 aa24.01■■□□□ 1.43
NPAS3-206ENST00000548645 ZC3H7BQ9UGR2 993 aaKnown RBP24.01■■□□□ 1.43
NPAS3-206ENST00000548645 KLHL2O95198 593 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 STBD1O95210 358 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 NRLP54845 237 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 IRX4P78413 519 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 ZNF394Q53GI3 561 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 ARCQ7LC44 396 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 HIC2Q96JB3 615 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 HAPLN2Q9GZV7 340 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 SMYD3Q9H7B4 428 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 SEPT9Q9UHD8 586 aaPredicted RBP24■■□□□ 1.43
NPAS3-206ENST00000548645 PCDHGC3Q9UN70 934 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 VAV1P15498 845 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 RPS6P62753 249 aaKnown RBP24■■□□□ 1.43
NPAS3-206ENST00000548645 SYCP2LQ5T4T6 812 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 LPCAT4Q643R3 524 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 GDPD5Q8WTR4 605 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 ZBTB45Q96K62 511 aaPredicted RBP24■■□□□ 1.43
NPAS3-206ENST00000548645 C20orf27Q9GZN8 174 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 OCEL1Q9H607 264 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 CXorf49A8MYA2 514 aaPredicted RBP24■■□□□ 1.43
NPAS3-206ENST00000548645 PRKCHP24723 683 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 MSLNQ13421 630 aaPredicted RBP24■■□□□ 1.43
NPAS3-206ENST00000548645 MMEL1Q495T6 779 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 ZBTB41Q5SVQ8 909 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 JOSD2Q8TAC2 188 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 RMDN3Q96TC7 470 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 PDCD2LQ9BRP1 358 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 EPB41L1Q9H4G0 881 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 CYP26B1Q9NR63 512 aa24■■□□□ 1.43
NPAS3-206ENST00000548645 ASS1P00966 412 aaKnown RBP23.99■■□□□ 1.43
NPAS3-206ENST00000548645 CRHR1P34998 444 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 YWHAZP63104 245 aaKnown RBP23.99■■□□□ 1.43
NPAS3-206ENST00000548645 LCA5Q86VQ0 697 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 CALN1Q9BXU9 219 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 XAB2Q9HCS7 855 aaKnown RBP23.99■■□□□ 1.43
NPAS3-206ENST00000548645 CNTNAP2Q9UHC6 1331 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 GRIA2P42262 883 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 AQP4P55087 323 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 NDUFAF2Q8N183 169 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 CMASQ8NFW8 434 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-206ENST00000548645 PPP1R14CQ8TAE6 165 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 STN1Q9H668 368 aaKnown RBP23.99■■□□□ 1.43
NPAS3-206ENST00000548645 RSAD1Q9HA92 442 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 CISHQ9NSE2 258 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 PCSK1NQ9UHG2 260 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 ADAMTS6Q9UKP5 1117 aa23.99■■□□□ 1.43
NPAS3-206ENST00000548645 LGR5O75473 907 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 COPAP53621 1224 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 BMPR2Q13873 1038 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 RNF111Q6ZNA4 994 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 KIAA0319LQ8IZA0 1049 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 GLIS2Q9BZE0 524 aaPredicted RBP23.98■■□□□ 1.43
NPAS3-206ENST00000548645 RAB6BQ9NRW1 208 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 SSX2IPQ9Y2D8 614 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 SCN9AQ15858 1988 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 A6NJR5 290 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 PIGRP01833 764 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 CHN2P52757 468 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 R3HDM1Q15032 1099 aaKnown RBP23.98■■□□□ 1.43
NPAS3-206ENST00000548645 PDK3Q15120 406 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 SWSAP1Q6NVH7 229 aa23.98■■□□□ 1.43
NPAS3-206ENST00000548645 APOBEC2Q9Y235 224 aaKnown RBP23.98■■□□□ 1.43
NPAS3-206ENST00000548645 IRF6O14896 467 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms