RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 STXBP5LQ9Y2K9 1186 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 PCDHGA2Q9Y5H1 932 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 SBNO2Q9Y2G9 1366 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 SPTBN5Q9NRC6 3674 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 CACNA1SQ13698 1873 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 MYH14Q7Z406 1995 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 VCANP13611 3396 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 H0YIZ8 118 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 ZNF213O14771 459 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 PRKD3O94806 890 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 RPLP2P05387 115 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 CHRM5P08912 532 aaPredicted RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 GYS1P13807 737 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 CPEP16870 476 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 CD6P30203 668 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 LINC00205P59089 165 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 SEMA3AQ14563 771 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 LRRC41Q15345 812 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 SFRP4Q6FHJ7 346 aaPredicted RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 TRIM72Q6ZMU5 477 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 RBBP6Q7Z6E9 1792 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 DCBLD1Q8N8Z6 715 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 PNLDC1Q8NA58 520 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 TMIEQ8NEW7 156 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 KLHDC4Q8TBB5 520 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 ZCRB1Q8TBF4 217 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 WDR66Q8TBY9 1149 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 COQ8BQ96D53 544 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 TMX3Q96JJ7 454 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 C5orf34Q96MH7 638 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 CNPPD1Q9BV87 410 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 TMX1Q9H3N1 280 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 SPC25Q9HBM1 224 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 DDX21Q9NR30 783 aaKnown RBP eCLIP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 MAN1C1Q9NR34 630 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 GNL3LQ9NVN8 582 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 VSX1Q9NZR4 365 aaPredicted RBP3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 SCN11AQ9UI33 1791 aa3.06□□□□□ -1.92
DEPDC4-204ENST00000547823 PIEZO1Q92508 2521 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 KAT6AQ92794 2004 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 PAPPA2Q9BXP8 1791 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 COL5A3P25940 1745 aaPredicted RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 SLC16A3O15427 465 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 NPSP0C0P6 89 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 JUPP14923 745 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 EPHX2P34913 555 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 SCAND1P57086 179 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 DDR1Q08345 913 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 ITPK1Q13572 414 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 KCTD2Q14681 263 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 RBM20Q5T481 1227 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 PPP4R3AQ6IN85 833 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 LVRNQ6Q4G3 990 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 SHC4Q6S5L8 630 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 MTHFD1LQ6UB35 978 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 CTU1Q7Z7A3 348 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 DTX2Q86UW9 622 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 DDX42Q86XP3 938 aaKnown RBP eCLIP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 SPATS2Q86XZ4 545 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 KRT78Q8N1N4 520 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 FAM109AQ8N4B1 249 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 IFI44Q8TCB0 444 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 HDAC10Q969S8 669 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 DAZAP1Q96EP5 407 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 CCM2LQ9NUG4 571 aaPredicted RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 C14orf119Q9NWQ9 140 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 SIDT1Q9NXL6 827 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 CALCOCO1Q9P1Z2 691 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 GPR45Q9Y5Y3 372 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 NCOR1O75376 2440 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 LAMB4A4D0S4 1761 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 NRXN2Q9P2S2 1712 aa3.05□□□□□ -1.92
DEPDC4-204ENST00000547823 ZNF831Q5JPB2 1677 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 CACNA1GO43497 2377 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 LAMA3Q16787 3333 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 TTC21BQ7Z4L5 1316 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 ERVV-2B6SEH9 535 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 POC1B-GALNT4F8VUJ3 575 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 H0YGN5 161 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 UBE2Q2LH0YL09 131 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 K7ESF4 209 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 GNAI3P08754 354 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 NHLRC4P0CG21 123 aaPredicted RBP3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 GPR3P46089 330 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 ERVK-21P61565 698 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 GNAI1P63096 354 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 HYAL1Q12794 435 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 ERV3-1Q14264 604 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 NPY5RQ15761 445 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 PKN2Q16513 984 aaKnown RBP3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 KRTAP27-1Q3LI81 207 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 Q4G0T1 1027 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 PCID2Q5JVF3 399 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 RNF187Q5TA31 235 aaPredicted RBP3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 RNF219Q5W0B1 726 aaPredicted RBP3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 CST9Q5W186 159 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 GADL1Q6ZQY3 521 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 C9orf47Q6ZRZ4 202 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 PNMA8AQ86V59 439 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms