RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 CD101Q93033 1021 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 SMARCE1Q969G3 411 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 FAXDC2Q96IV6 333 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 ARID3AQ99856 593 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 NT5C1AQ9BXI3 368 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 IMPG2Q9BZV3 1241 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CCSER2Q9H7U1 834 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CFAP97Q9P2B7 532 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 COQ4Q9Y3A0 265 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 ANTXRLA6NF34 631 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 SCAMP3O14828 347 aaKnown RBP10.9□□□□□ -0.66
BEST3-208ENST00000547208 GREM1O60565 184 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 GADD45BO75293 160 aaPredicted RBP10.9□□□□□ -0.66
BEST3-208ENST00000547208 SMC2O95347 1197 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 NFATC1O95644 943 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 FAM200BP0CF97 657 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 MBL2P11226 248 aaPredicted RBP10.9□□□□□ -0.66
BEST3-208ENST00000547208 ADORA2BP29275 332 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 FKBP3Q00688 224 aaKnown RBP10.9□□□□□ -0.66
BEST3-208ENST00000547208 LRRC63Q05C16 580 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 SRSF5Q13243 272 aaKnown RBP10.9□□□□□ -0.66
BEST3-208ENST00000547208 HECTD3Q5T447 861 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 LONP2Q86WA8 852 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 WBP2Q969T9 261 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 SLC35C1Q96A29 364 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 DUSP9Q99956 384 aaKnown RBP10.9□□□□□ -0.66
BEST3-208ENST00000547208 PNPLA8Q9NP80 782 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 POLR3BQ9NW08 1133 aaPredicted RBP10.9□□□□□ -0.66
BEST3-208ENST00000547208 OSER1Q9NX31 292 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 RAB20Q9NX57 234 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 MAN1B1Q9UKM7 699 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 SCML2Q9UQR0 700 aa10.9□□□□□ -0.66
BEST3-208ENST00000547208 THADAQ6YHU6 1953 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 E2F8A0AVK6 867 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 K7EQS6 105 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 CYP26A1O43174 497 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 STX10O60499 249 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 RAD23BP54727 409 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 MESP2Q0VG99 397 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 DHCR24Q15392 516 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 RSPO4Q2I0M5 234 aaPredicted RBP10.89□□□□□ -0.67
BEST3-208ENST00000547208 FBXO43Q4G163 708 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 DCAF17Q5H9S7 520 aaPredicted RBP10.89□□□□□ -0.67
BEST3-208ENST00000547208 PPP1R26Q5T8A7 1209 aaPredicted RBP10.89□□□□□ -0.67
BEST3-208ENST00000547208 HEATR6Q6AI08 1181 aaKnown RBP10.89□□□□□ -0.67
BEST3-208ENST00000547208 ISM2Q6H9L7 571 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 RHBDF2Q6PJF5 856 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 WDR5BQ86VZ2 330 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 C12orf40Q86WS4 652 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 DDX42Q86XP3 938 aaKnown RBP eCLIP10.89□□□□□ -0.67
BEST3-208ENST00000547208 SFTPA1Q8IWL2 248 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 PHTF2Q8N3S3 785 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 SLC4A11Q8NBS3 891 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 TATDN2Q93075 761 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 TSG101Q99816 390 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 HINFPQ9BQA5 517 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 FBXO44Q9H4M3 255 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 NMUR1Q9HB89 426 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 PARD6AQ9NPB6 346 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 CYLDQ9NQC7 956 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 CISHQ9NSE2 258 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 NCDNQ9UBB6 729 aa10.89□□□□□ -0.67
BEST3-208ENST00000547208 CCDC163A0A0D9SF12 145 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 SLC9A3R1O14745 358 aaPredicted RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 TLR5O60602 858 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 ATG13O75143 517 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 TBX18O95935 607 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 CNR2P34972 360 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 PXNP49023 591 aaPredicted RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 NR1H3Q13133 447 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 MORC3Q14149 939 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 LPAL2Q16609 132 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 ARHGAP17Q68EM7 881 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 TTI2Q6NXR4 508 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 SYT13Q7L8C5 426 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 SCD5Q86SK9 330 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 BBS7Q8IWZ6 715 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 UBR7Q8N806 425 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 CCDC150Q8NCX0 1101 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 RPLP0P6Q8NHW5 317 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 JAKMIP2Q96AA8 810 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 TMEM176AQ96HP8 235 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 DHTKD1Q96HY7 919 aaPredicted RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 KLF16Q9BXK1 252 aaPredicted RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 DUSP16Q9BY84 665 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 GTPBP4Q9BZE4 634 aaKnown RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 FAM124BQ9H5Z6 455 aaPredicted RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 TLR8Q9NR97 1041 aaKnown RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 DLL3Q9NYJ7 618 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 ARMCX3Q9UH62 379 aaPredicted RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
BEST3-208ENST00000547208 USP3Q9Y6I4 520 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 CHD8Q9HCK8 2581 aa10.88□□□□□ -0.67
BEST3-208ENST00000547208 A0A0A0MRY4 1105 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 A0A1W2PQH9 124 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 PSMA7O14818 248 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 ACO1P21399 889 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms