RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 NDRG1Q92597 394 aaKnown RBP17.68■□□□□ 0.42
LTBR-215ENST00000546296 NOX5Q96PH1 765 aa17.68■□□□□ 0.42
LTBR-215ENST00000546296 MIS12Q9H081 205 aa17.68■□□□□ 0.42
LTBR-215ENST00000546296 LHX5Q9H2C1 402 aa17.68■□□□□ 0.42
LTBR-215ENST00000546296 NMUR1Q9HB89 426 aa17.68■□□□□ 0.42
LTBR-215ENST00000546296 CNGB3Q9NQW8 809 aa17.68■□□□□ 0.42
LTBR-215ENST00000546296 SMPD4Q9NXE4 827 aa17.68■□□□□ 0.42
LTBR-215ENST00000546296 ARHGAP26Q9UNA1 814 aa17.68■□□□□ 0.42
LTBR-215ENST00000546296 DOCK8Q8NF50 2099 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 FBXO21O94952 628 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 CCDC172P0C7W6 258 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 ATP5C1P36542 298 aaKnown RBP17.67■□□□□ 0.42
LTBR-215ENST00000546296 SLC7A9P82251 487 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 PFKPQ01813 784 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 C10orf120Q5SQS8 335 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 CC2D1AQ6P1N0 951 aaPredicted RBP17.67■□□□□ 0.42
LTBR-215ENST00000546296 RSRC2Q7L4I2 434 aaKnown RBP17.67■□□□□ 0.42
LTBR-215ENST00000546296 NOP9Q86U38 636 aaKnown RBP17.67■□□□□ 0.42
LTBR-215ENST00000546296 TMEM35BQ8NCS4 154 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 SH3RF2Q8TEC5 729 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 GOLGA1Q92805 767 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 LRRC3BQ96PB8 259 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 CDK5RAP1Q96SZ6 601 aaKnown RBP17.67■□□□□ 0.42
LTBR-215ENST00000546296 ANP32EQ9BTT0 268 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 NUP58Q9BVL2 599 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 XPO4Q9C0E2 1151 aaKnown RBP17.67■□□□□ 0.42
LTBR-215ENST00000546296 OSER1Q9NX31 292 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 CPQQ9Y646 472 aa17.67■□□□□ 0.42
LTBR-215ENST00000546296 TBX18O95935 607 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 SNX16P57768 344 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 SIGLEC14Q08ET2 396 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 PDCLQ13371 301 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 ARHGAP29Q52LW3 1261 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 BTBD8Q5XKL5 378 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 TRIM67Q6ZTA4 783 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 ZNF677Q86XU0 584 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 FMNL3Q8IVF7 1028 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 SCUBE3Q8IX30 993 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 WDTC1Q8N5D0 677 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 C1orf131Q8NDD1 294 aaKnown RBP17.66■□□□□ 0.42
LTBR-215ENST00000546296 EPS8L1Q8TE68 723 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 IRF7Q92985 503 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 PPP1R13BQ96KQ4 1090 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 SLC4A5Q9BY07 1137 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 EDEM3Q9BZQ6 932 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 CYLDQ9NQC7 956 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 SLC2A4RGQ9NR83 387 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.66■□□□□ 0.42
LTBR-215ENST00000546296 CLIC5Q9NZA1 410 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 CYTH4Q9UIA0 394 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 NUDT5Q9UKK9 219 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 MYH10P35580 1976 aa17.66■□□□□ 0.42
LTBR-215ENST00000546296 CUL9Q8IWT3 2517 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 YJEFN3A6XGL0 299 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 E7ENQ6 273 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 LEFTY2O00292 366 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 CHADO15335 359 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 GABBR2O75899 941 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 OLFM2O95897 454 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 MMEP08473 750 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 FERP16591 822 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 DAOAP59103 153 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 CDR2Q01850 454 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 FCHO2Q0JRZ9 810 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 BSPRYQ5W0U4 402 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 TMEM110Q86TL2 294 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 DDX42Q86XP3 938 aaKnown RBP eCLIP17.65■□□□□ 0.42
LTBR-215ENST00000546296 SCML4Q8N228 414 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 CSGALNACT1Q8TDX6 532 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 RNF139Q8WU17 664 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 SLC20A1Q8WUM9 679 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 IRGQQ8WZA9 623 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 DDX1Q92499 740 aaKnown RBP17.65■□□□□ 0.42
LTBR-215ENST00000546296 GKN1Q9NS71 199 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 CFAP97Q9P2B7 532 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 WNT16Q9UBV4 365 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 DNMT3LQ9UJW3 386 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 CA14Q9ULX7 337 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 MYO6Q9UM54 1294 aa17.65■□□□□ 0.42
LTBR-215ENST00000546296 GREB1Q4ZG55 1949 aa17.64■□□□□ 0.42
LTBR-215ENST00000546296 TMEM221A6NGB7 291 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 E5RJQ4 531 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 M0R296 226 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 SART1O43290 800 aaKnown RBP17.64■□□□□ 0.41
LTBR-215ENST00000546296 PBX1P40424 430 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 RPL34P49207 117 aaKnown RBP17.64■□□□□ 0.41
LTBR-215ENST00000546296 GOLGA8FQ08AF8 430 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 GOLGA8DPQ0D2H9 430 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 EFEMP1Q12805 493 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 MTF1Q14872 753 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 ASIC2Q16515 512 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 MIB1Q86YT6 1006 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 ZNF397Q8NF99 534 aaPredicted RBP17.64■□□□□ 0.41
LTBR-215ENST00000546296 CLEC4CQ8WTT0 213 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 CPLX3Q8WVH0 158 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 BAP1Q92560 729 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 EDEM1Q92611 657 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 ZFYVE19Q96K21 471 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 RBSNQ9H1K0 784 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms