RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SPATA6LQ8N4H0 392 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 SMC1BQ8NDV3 1235 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 EXD1Q8NHP7 514 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 C18orf25Q96B23 403 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 MANSC1Q9H8J5 431 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 TMEM165Q9HC07 324 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 STOML1Q9UBI4 398 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 CCDC189A1A4V9 331 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 DPPA5A6NC42 116 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 APOL1O14791 398 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 UGT1A9O60656 530 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 STK10O94804 968 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 UBTFL6P0CB48 400 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 MLH1P40692 756 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 EFNA5P52803 228 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 HADHBP55084 474 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 GEMIN4P57678 1058 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 BEX3Q00994 111 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 RCN1Q15293 331 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 C1orf146Q5VVC0 180 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 ABHD15Q6UXT9 468 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 MYLK4Q86YV6 388 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 CD101Q93033 1021 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 PIWIL1Q96J94 861 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 NT5C1AQ9BXI3 368 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 UGT1A7Q9HAW7 530 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 UGT1A10Q9HAW8 530 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 UGT1A8Q9HAW9 530 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 SHANK3Q9BYB0 1731 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 KIAA1551Q9HCM1 1747 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 GPR25O00155 361 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 DFFAO00273 331 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 NVLO15381 856 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 LIASO43766 372 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 C4BPAP04003 597 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 ZCCHC18P0CG32 403 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 ATP4AP20648 1035 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 IL1R2P27930 398 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 GNL1P36915 607 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 CASP2P42575 452 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 GRAMD1BQ3KR37 738 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 SLC30A9Q6PML9 568 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 TRIM72Q6ZMU5 477 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 CEP128Q6ZU80 1094 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 TAS1R3Q7RTX0 852 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 OLIG1Q8TAK6 271 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 SLC7A14Q8TBB6 771 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 SLC26A7Q8TE54 656 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 FBXO41Q8TF61 875 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 ATP2A3Q93084 1043 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 CDCA5Q96FF9 252 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 LGMNQ99538 433 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 SCOCQ9UIL1 159 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 STRIP2Q9ULQ0 834 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 MYPNQ86TC9 1320 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 COL14A1Q05707 1796 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 DNALI1O14645 258 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 SMNDC1O75940 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 ACO1P21399 889 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 GPD1P21695 349 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 OSBPP22059 807 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 GRIA1P42261 906 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 TGFB2P61812 414 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 NR1H3Q13133 447 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 PEX6Q13608 980 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 BLMHQ13867 455 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 TFDP2Q14188 446 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 CGB2Q6NT52 195 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 MPZL3Q6UWV2 235 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 TTC7BQ86TV6 843 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 APOBEC3FQ8IUX4 373 aaKnown RBP10.17□□□□□ -0.78
TRAF1-203ENST00000546084 PIP4K2CQ8TBX8 421 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 TEKT4Q8WW24 435 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 MOCOSQ96EN8 888 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 ETAA1Q9NY74 926 aa10.17□□□□□ -0.78
TRAF1-203ENST00000546084 ATP8B3O60423 1300 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 C19orf81C9J6K1 198 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 OAS1P00973 400 aaKnown RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 ERBB2P04626 1255 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 EDN1P05305 212 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 GNAT1P11488 350 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 SKIP12755 728 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 PGM1P36871 562 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 THOC5Q13769 683 aaKnown RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 MXD4Q14582 209 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 IER5Q5VY09 327 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 TRABD2AQ86V40 505 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 PYROXD2Q8N2H3 581 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 KLHL23Q8NBE8 558 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 OPTNQ96CV9 577 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 TMEM176AQ96HP8 235 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 MFSD14AQ96MC6 490 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 HAPLN2Q9GZV7 340 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 CDT1Q9H211 546 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 DENND2DQ9H6A0 471 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 MAN1C1Q9NR34 630 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms