RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 BTNL9Q6UXG8 535 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 SPATA4Q8NEY3 305 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 ABTB1Q969K4 478 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 SMYD3Q9H7B4 428 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 GIMAP4Q9NUV9 329 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 PCMTD2Q9NV79 361 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 SMIM22K7EJ46 135 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 SPRP35270 261 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 PPM1AP35813 382 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 RAP1GDS1P52306 607 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 EVX2Q03828 476 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 GRIK3Q13003 919 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 MORF4L2Q15014 288 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 MAML3Q96JK9 1138 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 ELAC2Q9BQ52 826 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 ZFP69BQ9UJL9 534 aa9.36□□□□□ -0.91
MTHFD1-202ENST00000545908 CRTAMO95727 393 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 GGCXP38435 758 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 TTI2Q6NXR4 508 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 DCLRE1AQ6PJP8 1040 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 SLC20A1Q8WUM9 679 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 IL17RAQ96F46 866 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 MTMR9Q96QG7 549 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 RBM15Q96T37 977 aaKnown RBP eCLIP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 AGXT2Q9BYV1 514 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 C11orf49Q9H6J7 331 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 GTF3C4Q9UKN8 822 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 TNFSF13BQ9Y275 285 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 BRAFP15056 766 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PTPN1P18031 435 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 COILP38432 576 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 TUBP50607 506 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 CRHR2Q13324 411 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 TBC1D13Q9NVG8 400 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 MRPS23Q9Y3D9 190 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 ZW10O43264 779 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 MAP3K6O95382 1288 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 APLP1P51693 650 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 DUSP28Q4G0W2 176 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 FAM47EQ6ZV65 393 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 LRRC8DQ7L1W4 858 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 DSG4Q86SJ6 1040 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PHACTR4Q8IZ21 702 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 MRPL40Q9NQ50 206 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 WWOXQ9NZC7 414 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PLCH1Q4KWH8 1693 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 CA12O43570 354 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 IGSF6O95976 241 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PLEKP08567 350 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 ERVK-10P10266 1014 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 MAP2K2P36507 400 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 ITGA8P53708 1063 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PTK7Q13308 1070 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 ACBD5Q5T8D3 534 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 FBXO22Q8NEZ5 403 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 ENGASEQ8NFI3 743 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 CYTH2Q99418 400 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 RAB23Q9ULC3 237 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 TOMM70O94826 608 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 ASGR1P07306 291 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 GJB1P08034 283 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 RBP3P10745 1247 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 CYP2A6P11509 494 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 TGM2P21980 687 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 RPL9P32969 192 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PPP2R2AP63151 447 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PHKG1Q16816 387 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 ZNF669Q96BR6 464 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 LRRC1Q9BTT6 524 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 PSMC3IPQ9P2W1 217 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 RNF112Q9ULX5 631 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 HPSEQ9Y251 543 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 HES2Q9Y543 173 aa9.35□□□□□ -0.91
MTHFD1-202ENST00000545908 SLC9A3R1O14745 358 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 NFICP08651 508 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 PAEPP09466 180 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 MSH3P20585 1137 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 UGCGQ16739 394 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 BEND6Q5SZJ8 279 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 FAXCQ5TGI0 409 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 C3orf62Q6ZUJ4 267 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 ABRAQ8N0Z2 381 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 RFWD2Q8NHY2 731 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 ASPSCR1Q9BZE9 553 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 FAM129AQ9BZQ8 928 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 OSGEPL1Q9H4B0 414 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 BTBD7Q9P203 1132 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 CDH9Q9ULB4 789 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 TARSL2A2RTX5 802 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 E2F6O75461 281 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 EIF4BP23588 611 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 PDCLQ13371 301 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 NOL9Q5SY16 702 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 EMC1Q8N766 993 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 TC2NQ8N9U0 490 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 MYLPFQ96A32 169 aa9.34□□□□□ -0.91
MTHFD1-202ENST00000545908 MTBPQ96DY7 904 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms