RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 EPS8L2Q9H6S3 715 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SAYSD1Q9NPB0 183 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 RIC8AQ9NPQ8 531 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 WASH6PQ9NQA3 447 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 PRDM8Q9NQV8 689 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SLC2A4RGQ9NR83 387 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 POGKQ9P215 609 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 HDAC5Q9UQL6 1122 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 REXO2Q9Y3B8 237 aaKnown RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SCINQ9Y6U3 715 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 TRAPPC8Q9Y2L5 1435 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SUPT6HQ7KZ85 1726 aaKnown RBP4.7□□□□□ -1.66
SNHG1-222ENST00000545308 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 PRSS47A8MTI9 375 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 hCG_1984214I3L0E3 225 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 SNX2O60749 519 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 PIAS2O75928 621 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 NTSR2O95665 410 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 GLP2RO95838 553 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 LDHCP07864 332 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 GCSHP23434 173 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 KLRK1P26718 216 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 CASP2P42575 452 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 RXRGP48443 463 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 SEC24CP53992 1094 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 IRX6P78412 446 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-222ENST00000545308 NSUN2Q08J23 767 aaKnown RBP eCLIP4.7□□□□□ -1.66
SNHG1-222ENST00000545308 CRHR2Q13324 411 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 PTCHD3Q3KNS1 767 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 CACHD1Q5VU97 1274 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 MRNIPQ6NTE8 343 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 TAPT1Q6NXT6 567 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 RSRC2Q7L4I2 434 aaKnown RBP4.7□□□□□ -1.66
SNHG1-222ENST00000545308 HEATR4Q86WZ0 1026 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 C2CD5Q86YS7 1000 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 SLC44A2Q8IWA5 706 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-222ENST00000545308 PSD4Q8NDX1 1056 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 POC1BQ8TC44 478 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 BPIFB1Q8TDL5 484 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 ST8SIA2Q92186 375 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 MAELQ96JY0 434 aaKnown RBP4.7□□□□□ -1.66
SNHG1-222ENST00000545308 MOGAT1Q96PD6 335 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 MED15Q96RN5 788 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 SMOQ99835 787 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 RTKNQ9BST9 563 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 FAM83DQ9H4H8 585 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 ZBTB26Q9HCK0 441 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 UBN1Q9NPG3 1134 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 ZSCAN32Q9NX65 697 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 HSFX1Q9UBD0 423 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 HPSEQ9Y251 543 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 MRPS17Q9Y2R5 130 aaKnown RBP4.7□□□□□ -1.66
SNHG1-222ENST00000545308 SH3BP1Q9Y3L3 701 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 ZFYVE16Q7Z3T8 1539 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 ARHGEF40Q8TER5 1519 aa4.7□□□□□ -1.66
SNHG1-222ENST00000545308 LTBP4Q8N2S1 1624 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 ZMYM4Q5VZL5 1548 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 OR2W5A6NFC9 320 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 AQP7P3A6NL99 342 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 DHHO43323 396 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 RAMP2O60895 175 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 COQ9O75208 318 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 PPFIA2O75334 1257 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 MBD4O95243 580 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 ATXN1LP0C7T5 689 aaKnown RBP4.69□□□□□ -1.66
SNHG1-222ENST00000545308 KRT4P19013 534 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 GNAT2P19087 354 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 KCNA3P22001 575 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 LIFRP42702 1097 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 GCLCP48506 637 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-222ENST00000545308 DGKEP52429 567 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 POLE2P56282 527 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 AP2B1P63010 937 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 KRT17Q04695 432 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 SCAPQ12770 1279 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 FHL3Q13643 280 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 EFR3AQ14156 821 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 ADCK5Q3MIX3 580 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 MGAT5BQ3V5L5 792 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 MFSD5Q6N075 450 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 FAM180BQ6P0A1 224 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 Q6ZPA2 131 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 TBC1D1Q86TI0 1168 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-222ENST00000545308 CCDC117Q8IWD4 279 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-222ENST00000545308 COLGALT2Q8IYK4 626 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 ANKRD35Q8N283 1001 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 MDGA1Q8NFP4 955 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 CPT1CQ8TCG5 803 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 CSGALNACT1Q8TDX6 532 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 AFG1LQ8WV93 481 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 THAP4Q8WY91 577 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 FAM227BQ96M60 508 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 CRAMP1Q96RY5 1269 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 SLC26A6Q9BXS9 759 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 SLC25A32Q9H2D1 315 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 CTTNBP2NLQ9P2B4 639 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 CA14Q9ULX7 337 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 SHOC2Q9UQ13 582 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 PTPRKQ15262 1439 aa4.69□□□□□ -1.66
SNHG1-222ENST00000545308 C9orf84Q5VXU9 1444 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms