RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	MDGA1	Q8NFP4	955 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	SSC4D	Q8WTU2	575 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	KCNE4	Q8WWG9	221 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	ACD	Q96AP0	544 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	ZNF578	Q96N58	590 aa	Predicted RBP	7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	PPP1R16B	Q96T49	567 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	PDRG1	Q9NUG6	133 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	MAP3K20	Q9NYL2	800 aa	Known RBP	7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	PLAA	Q9Y263	795 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	PRG3	Q9Y2Y8	225 aa	Predicted RBP	7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	MRPL11	Q9Y3B7	192 aa	Known RBP	7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	PCDHGB2	Q9Y5G2	931 aa		7.39	□□□□□ -1.23
LDHA-223	ENST00000545215	CCDC196	A0A1B0GTZ2	297 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	LCE2B	O14633	110 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	AP5Z1	O43299	807 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	LRG1	P02750	347 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	SLFN14	P0C7P3	912 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	KIF5B	P33176	963 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	CCNF	P41002	786 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	GNAQ	P50148	359 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	CLDN6	P56747	220 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	SCRN1	Q12765	414 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	SEC23A	Q15436	765 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	PLEKHG6	Q3KR16	790 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	ZBTB37	Q5TC79	503 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	CYB5R4	Q7L1T6	521 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	MCAT	Q8IVS2	390 aa	Known RBP	7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	SLFN12	Q8IYM2	578 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	URGCP	Q8TCY9	931 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	IGDCC4	Q8TDY8	1250 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	ZNF274	Q96GC6	653 aa	Predicted RBP	7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	ZSCAN31	Q96LW9	406 aa	Predicted RBP	7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	PCYT2	Q99447	389 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	AMN	Q9BXJ7	453 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	IRX2	Q9BZI1	471 aa	Predicted RBP	7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	GPR62	Q9BZJ7	368 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	JMJD4	Q9H9V9	463 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	TM7SF3	Q9NS93	570 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	KLHL42	Q9P2K6	505 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	TAF6L	Q9Y6J9	622 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	PTPRD	P23468	1912 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	CABIN1	Q9Y6J0	2220 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	HIVEP3	Q5T1R4	2406 aa		7.38	□□□□□ -1.23
LDHA-223	ENST00000545215	KLRF2	D3W0D1	207 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	DDX3Y	O15523	660 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ZNF623	O75123	536 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	PPFIA2	O75334	1257 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	CDK4	P11802	303 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	DRD1	P21728	446 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	POLR2B	P30876	1174 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	NTF4	P34130	210 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	CASR	P41180	1078 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	CCR2	P41597	374 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	EPHA5	P54756	1037 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ANTXR2	P58335	489 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ETF1	P62495	437 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ZNF33A	Q06730	810 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	TNK2	Q07912	1038 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	GRIK2	Q13002	908 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	PTPA	Q15257	358 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	SKIDA1	Q1XH10	827 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ITPRIPL2	Q3MIP1	535 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ARL13B	Q3SXY8	428 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ARHGAP29	Q52LW3	1261 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	CPLX2	Q6PUV4	134 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	PRSS55	Q6UWB4	352 aa	Predicted RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215		Q6ZUG5	572 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	CHSY3	Q70JA7	882 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	MAMDC2	Q7Z304	686 aa	Predicted RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	HAUS6	Q7Z4H7	955 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	COLGALT2	Q8IYK4	626 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	SPATA3	Q8NHX4	192 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	CTCFL	Q8NI51	663 aa	Predicted RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	BRF1	Q92994	677 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	SGSM3	Q96HU1	749 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	ZFYVE19	Q96K21	471 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	LZTS2	Q9BRK4	669 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	IL21R	Q9HBE5	538 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	LY9	Q9HBG7	655 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	FBRSL1	Q9HCM7	1045 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	RBM28	Q9NW13	759 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	TJP2	Q9UDY2	1190 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	LIMCH1	Q9UPQ0	1083 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	BTBD3	Q9Y2F9	522 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	AKAP9	Q99996	3911 aa		7.37	□□□□□ -1.23
LDHA-223	ENST00000545215	BAZ2B	Q9UIF8	2168 aa	Known RBP	7.37	□□□□□ -1.23
LDHA-223	ENST00000545215		F8W810	466 aa		7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	FANCG	O15287	622 aa		7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	ZBTB43	O43298	467 aa		7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	DEAF1	O75398	565 aa	Predicted RBP	7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	VTN	P04004	478 aa		7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	FAM87A	P0C7U9	286 aa		7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	NID1	P14543	1247 aa		7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	SMARCA1	P28370	1054 aa		7.36	□□□□□ -1.23
LDHA-223	ENST00000545215	OR1G1	P47890	313 aa		7.36	□□□□□ -1.23

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