RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 OBSL1O75147 1896 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 A0A1W2PQH9 124 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 E2F8A0AVK6 867 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 OTOL1A6NHN0 477 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-216ENST00000544996 CHRNB1P11230 501 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 PGFP49763 221 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 TKTL1P51854 596 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 GRSF1Q12849 480 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC78-216ENST00000544996 FZD5Q13467 585 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 PPP2R5DQ14738 602 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 CNGA2Q16280 664 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 VWA3BQ502W6 1294 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 HSP90AA4PQ58FG1 418 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 CCDC183Q5T5S1 534 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 LCLAT1Q6UWP7 414 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 UBA3Q8TBC4 463 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 ENOX1Q8TC92 643 aaKnown RBP16.55■□□□□ 0.24
CCDC78-216ENST00000544996 TFAP2BQ92481 460 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 KREMEN1Q96MU8 473 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 TUBGCP2Q9BSJ2 902 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 CHRDQ9H2X0 955 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 NDST4Q9H3R1 872 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 FAM86C1Q9NVL1 165 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 ANO10Q9NW15 660 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 CLIC5Q9NZA1 410 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 APEX2Q9UBZ4 518 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 DNMT3LQ9UJW3 386 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 MUC6Q6W4X9 2439 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 DENND4CQ5VZ89 1909 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 TICRRQ7Z2Z1 1910 aa16.55■□□□□ 0.24
CCDC78-216ENST00000544996 KCNJ18B7U540 433 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-216ENST00000544996 PES1O00541 588 aaKnown RBP16.54■□□□□ 0.24
CCDC78-216ENST00000544996 TRDMT1O14717 391 aaKnown RBP16.54■□□□□ 0.24
CCDC78-216ENST00000544996 ZBED1O96006 694 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 RARGP13631 454 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 SLC9A1P19634 815 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 EEF1GP26641 437 aaKnown RBP16.54■□□□□ 0.24
CCDC78-216ENST00000544996 PON1P27169 355 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 GJA4P35212 333 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 ZNF132P52740 706 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 MTAPQ13126 283 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 KCNJ12Q14500 433 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 STX1AQ16623 288 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 RAB41Q5JT25 222 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 C10orf120Q5SQS8 335 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 ADGRG2Q8IZP9 1017 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 SIX6OS1Q8N1H7 587 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 SYNPOQ8N3V7 929 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 ZNF276Q8N554 614 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 OTUB2Q96DC9 234 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 ZFRQ96KR1 1074 aaKnown RBP16.54■□□□□ 0.24
CCDC78-216ENST00000544996 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC78-216ENST00000544996 OSER1Q9NX31 292 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 FBXO4Q9UKT5 387 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC78-216ENST00000544996 CNTN6Q9UQ52 1028 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 NFE2L3Q9Y4A8 694 aa16.54■□□□□ 0.24
CCDC78-216ENST00000544996 COL4A2P08572 1712 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 M0QYV0 167 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 MED7O43513 233 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 TBX18O95935 607 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 BRD2P25440 801 aaKnown RBP16.53■□□□□ 0.24
CCDC78-216ENST00000544996 PLA2G4AP47712 749 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 TCP11X2Q5H9J9 407 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 TMEM196Q5HYL7 178 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 MAMSTRQ6ZN01 415 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 SCD5Q86SK9 330 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 KCTD13Q8WZ19 329 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 P2RY13Q9BPV8 354 aa16.53■□□□□ 0.24
CCDC78-216ENST00000544996 SAMSN1Q9NSI8 373 aaKnown RBP16.53■□□□□ 0.24
CCDC78-216ENST00000544996 TULP2O00295 520 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 SCAMP3O14828 347 aaKnown RBP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 ADH1CP00326 375 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 TPM2P07951 284 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 SP9P0CG40 484 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 IRF1P10914 325 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 DRD1P21728 446 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 USP8P40818 1118 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 GALK1P51570 392 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 YWHAGP61981 247 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 CSTF1Q05048 431 aaKnown RBP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 ADIGQ0VDE8 80 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 CCINQ13939 588 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 ARHGAP44Q17R89 818 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 PKDCCQ504Y2 493 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 SMYD5Q6GMV2 418 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 PM20D1Q6GTS8 502 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 ZC3H14Q6PJT7 736 aaKnown RBP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 RSRC2Q7L4I2 434 aaKnown RBP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 SLC35F5Q8WV83 523 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 CD101Q93033 1021 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 KLF16Q9BXK1 252 aaPredicted RBP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 ULBP1Q9BZM6 244 aa16.52■□□□□ 0.24
CCDC78-216ENST00000544996 RBM12Q9NTZ6 932 aaKnown RBP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 LSM7Q9UK45 103 aaKnown RBP16.52■□□□□ 0.24
CCDC78-216ENST00000544996 WDFY4Q6ZS81 3184 aa16.52■□□□□ 0.23
CCDC78-216ENST00000544996 ANAPC1Q9H1A4 1944 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms