RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 OLIG1Q8TAK6 271 aa13.32□□□□□ -0.28
PDZD4-209ENST00000544474 NDEL1Q9GZM8 345 aa13.32□□□□□ -0.28
PDZD4-209ENST00000544474 DMAC2Q9NW81 257 aa13.32□□□□□ -0.28
PDZD4-209ENST00000544474 WRAP73Q9P2S5 460 aaPredicted RBP13.32□□□□□ -0.28
PDZD4-209ENST00000544474 XPO7Q9UIA9 1087 aaKnown RBP13.32□□□□□ -0.28
PDZD4-209ENST00000544474 SMG5Q9UPR3 1016 aaKnown RBP13.32□□□□□ -0.28
PDZD4-209ENST00000544474 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
PDZD4-209ENST00000544474 SPO11Q9Y5K1 396 aa13.32□□□□□ -0.28
PDZD4-209ENST00000544474 UGT1A9O60656 530 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 NDUFB10O96000 172 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 RPL10P27635 214 aaKnown RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 CRKP46108 304 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 BST1Q10588 318 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 ATP1A4Q13733 1029 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 LPIN1Q14693 890 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 PDK3Q15120 406 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 FNBP1LQ5T0N5 605 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 CLIP3Q96DZ5 547 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 MARK4Q96L34 752 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 OSBPL10Q9BXB5 764 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 TUT1Q9H6E5 874 aaKnown RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 UGT1A7Q9HAW7 530 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 UGT1A10Q9HAW8 530 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 UGT1A8Q9HAW9 530 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 C1orf112Q9NSG2 853 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 SLC17A6Q9P2U8 582 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 DNAH12Q6ZR08 3092 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 C2CD2LO14523 706 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 FSCN2O14926 492 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 COL6A2P12110 1019 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 GLRA2P23416 452 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 SERPINB5P36952 375 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 RPS6P62753 249 aaKnown RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 CDK16Q00536 496 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 SIX1Q15475 284 aaPredicted RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 LIN9Q5TKA1 542 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 C15orf52Q6ZUT6 534 aaKnown RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 SYDE1Q6ZW31 735 aaPredicted RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 HAUS6Q7Z4H7 955 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 NDUFAF2Q8N183 169 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 BBS5Q8N3I7 341 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 PPWD1Q96BP3 646 aaKnown RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 FAM32AQ9Y421 112 aaKnown RBP13.31□□□□□ -0.28
PDZD4-209ENST00000544474 UBE4BO95155 1302 aa13.31□□□□□ -0.28
PDZD4-209ENST00000544474 TPST1O60507 370 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 CST8O60676 142 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ENO3P13929 434 aaPredicted RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 PHBP35232 272 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 GDF10P55107 478 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 CRADDP78560 199 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 DMPKQ09013 629 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 SEPT6Q14141 434 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 BRDTQ58F21 947 aaPredicted RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 WDR44Q5JSH3 913 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 NLRX1Q86UT6 975 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 CRLF3Q8IUI8 442 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 SERAC1Q96JX3 654 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 TEKT3Q9BXF9 490 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 GLIS2Q9BZE0 524 aaPredicted RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ARMC7Q9H6L4 198 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 NYAP2Q9P242 653 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 HESX1Q9UBX0 185 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 BBOX1O75936 387 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 OXSR1O95747 527 aaPredicted RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ALDH2P05091 517 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ADRB2P07550 413 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 APRTP07741 180 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ELK3P41970 407 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 RXRGP48443 463 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 CHN2P52757 468 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 NFIL3Q16649 462 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ABCB5Q2M3G0 1257 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 C6orf52Q5T4I8 152 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ITPRIPL1Q6GPH6 555 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 Q6ZNX1 250 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 AMIGO2Q86SJ2 522 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 WDR75Q8IWA0 830 aaKnown RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 RHOT1Q8IXI2 618 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 PLEKHO2Q8TD55 490 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 COPS7BQ9H9Q2 264 aaPredicted RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 KANSL3Q9P2N6 904 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 ARHGAP26Q9UNA1 814 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 MYPNQ86TC9 1320 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 A0A1B0GTW7 788 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 TP73O15350 636 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 TRMUO75648 421 aaKnown RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 WEE2P0C1S8 567 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 IVDP26440 423 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 Q3C1V9 767 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 CDHR3Q6ZTQ4 885 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 SAMD3Q8N6K7 520 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 TTLL6Q8N841 843 aa13.3□□□□□ -0.28
PDZD4-209ENST00000544474 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDZD4-209ENST00000544474 TRPC7Q9HCX4 862 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms