RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TRIM11Q96F44 468 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 FAM81BQ96LP2 452 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 RUNDC3BQ96NL0 473 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 RBM15Q96T37 977 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHFR-223ENST00000544268 GCOM2Q9BZD3 368 aaPredicted RBP15.66■□□□□ 0.1
CHFR-223ENST00000544268 RAB6CQ9H0N0 254 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 ZWILCHQ9H900 591 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 ZMYND8Q9ULU4 1186 aaPredicted RBP15.66■□□□□ 0.1
CHFR-223ENST00000544268 TRIM33Q9UPN9 1127 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 CNTN6Q9UQ52 1028 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 ZNF148Q9UQR1 794 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 A0A1B0GVG6 124 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 TCRBV5S1A1TA0A578 114 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 SPAG7O75391 227 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 IFNB1P01574 187 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 CD48P09326 243 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 TPBGLP0DKB5 382 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 MCF2P10911 925 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 BRAFP15056 766 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 TAF5Q15542 800 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 TSNAXIP1Q2TAA8 658 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 WDR72Q3MJ13 1102 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 SYCP2LQ5T4T6 812 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 WDR49Q8IV35 697 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 MRPL47Q9HD33 250 aaKnown RBP15.66■□□□□ 0.1
CHFR-223ENST00000544268 ANK1P16157 1881 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 HMGCRP04035 888 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 KRT19P08727 400 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 STAG3L1P0CL83 205 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 IL1R2P27930 398 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 GCAP28676 217 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 HOXA11P31270 313 aaPredicted RBP15.65■□□□□ 0.1
CHFR-223ENST00000544268 RFC1P35251 1148 aaPredicted RBP15.65■□□□□ 0.1
CHFR-223ENST00000544268 ARSEP51690 589 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 GDF10P55107 478 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 NKX3-2P78367 333 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 CDC42EP1Q00587 391 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
CHFR-223ENST00000544268 DCUN1D2Q6PH85 259 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHFR-223ENST00000544268 EXD1Q8NHP7 514 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 RAET1EQ8TD07 263 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 TMEM40Q8WWA1 233 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 SPOCK2Q92563 424 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 SAYSD1Q9NPB0 183 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 PCMTD2Q9NV79 361 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 PEX11AO75192 247 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 UNC5CO95185 931 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 DARSP14868 501 aaKnown RBP15.65■□□□□ 0.1
CHFR-223ENST00000544268 ASPAP45381 313 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 POLE2P56282 527 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 GPS1Q13098 491 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 TMED2Q15363 201 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 PTPN20Q4JDL3 420 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 MAP3K21Q5TCX8 1036 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 OR52E8Q6IFG1 317 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 IRGCQ6NXR0 463 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 DNAJC24Q6P3W2 148 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 TAOK1Q7L7X3 1001 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 ENDOVQ8N8Q3 282 aaKnown RBP15.65■□□□□ 0.1
CHFR-223ENST00000544268 GRK7Q8WTQ7 553 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 IFT43Q96FT9 208 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 TWNKQ96RR1 684 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 ZCWPW1Q9H0M4 648 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 XYLT2Q9H1B5 865 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 RPF1Q9H9Y2 349 aaKnown RBP15.65■□□□□ 0.1
CHFR-223ENST00000544268 PRKAG3Q9UGI9 489 aa15.65■□□□□ 0.1
CHFR-223ENST00000544268 G3BP2Q9UN86 482 aaKnown RBP15.65■□□□□ 0.1
CHFR-223ENST00000544268 ASGR1P07306 291 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 PAX3P23760 479 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 TBXAS1P24557 533 aaPredicted RBP15.64■□□□□ 0.09
CHFR-223ENST00000544268 KCNA10Q16322 511 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 SPOCD1Q6ZMY3 1216 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 DPH6Q7L8W6 267 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 CATSPER4Q7RTX7 472 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 DNAJC9Q8WXX5 260 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 UTP4Q969X6 686 aaKnown RBP15.64■□□□□ 0.09
CHFR-223ENST00000544268 SERPINB12Q96P63 405 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 IMPG2Q9BZV3 1241 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 ETNK1Q9HBU6 452 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 DLGAP2Q9P1A6 1054 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 GTF2IRD1Q9UHL9 959 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 POC1B-GALNT4F8VUJ3 575 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 GSTA2P09210 222 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 CD19P15391 556 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 EIF4BP23588 611 aaKnown RBP15.64■□□□□ 0.09
CHFR-223ENST00000544268 MAGEA4P43358 317 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 PLCB3Q01970 1234 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 CCDC15Q0P6D6 951 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 DUOXA2Q1HG44 320 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 MFSD4BQ5TF39 518 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 RNF220Q5VTB9 566 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 GDF6Q6KF10 455 aaPredicted RBP15.64■□□□□ 0.09
CHFR-223ENST00000544268 CGB2Q6NT52 195 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 ANKMY2Q8IV38 441 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 KLHDC9Q8NEP7 349 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 ZNF296Q8WUU4 475 aaPredicted RBP15.64■□□□□ 0.09
CHFR-223ENST00000544268 ROPN1BQ9BZX4 212 aaPredicted RBP15.64■□□□□ 0.09
CHFR-223ENST00000544268 SDCBP2Q9H190 292 aa15.64■□□□□ 0.09
CHFR-223ENST00000544268 ROPN1Q9HAT0 212 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms