RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 JAM2P57087 298 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 YWHAGP61981 247 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDH4-201ENST00000543233 FOLH1Q04609 750 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 FAM83AQ86UY5 434 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 CPNE8Q86YQ8 564 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 KIAA2013Q8IYS2 634 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 MYO1HQ8N1T3 1032 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 SPERTQ8NA61 448 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 AGBL3Q8NEM8 1001 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 GABPB2Q8TAK5 448 aaPredicted RBP11.72□□□□□ -0.53
CDH4-201ENST00000543233 C10orf82Q8WW14 230 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 ADAM33Q9BZ11 813 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 GABBR1Q9UBS5 961 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 DALRD3Q5D0E6 543 aaKnown RBP11.72□□□□□ -0.53
CDH4-201ENST00000543233 DUPD1Q68J44 220 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 SPOPLQ6IQ16 392 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 CCDC81Q6ZN84 652 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 NLRX1Q86UT6 975 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 OSTM1Q86WC4 334 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 HELQQ8TDG4 1101 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 DHX38Q92620 1227 aaKnown RBP11.72□□□□□ -0.53
CDH4-201ENST00000543233 ZFRQ96KR1 1074 aaKnown RBP11.72□□□□□ -0.53
CDH4-201ENST00000543233 PDCD2LQ9BRP1 358 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 RNF38Q9H0F5 515 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 CLK4Q9HAZ1 481 aaKnown RBP11.72□□□□□ -0.53
CDH4-201ENST00000543233 SLC38A10Q9HBR0 1119 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 SAR1AQ9NR31 198 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 FBXO6Q9NRD1 293 aaPredicted RBP11.72□□□□□ -0.53
CDH4-201ENST00000543233 ARMCX1Q9P291 453 aa11.72□□□□□ -0.53
CDH4-201ENST00000543233 DENND3A2RUS2 1198 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 CYP26A1O43174 497 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 ADRB2P07550 413 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 RPL21P46778 160 aaKnown RBP11.71□□□□□ -0.53
CDH4-201ENST00000543233 MESDQ14696 234 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 NDUFA5Q16718 116 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 SWSAP1Q6NVH7 229 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 ZDHHC24Q6UX98 284 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 EEPD1Q7L9B9 569 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 XXYLT1Q8NBI6 393 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 ACTRT2Q8TDY3 377 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 EME1Q96AY2 570 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 THAP11Q96EK4 314 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 RUNDC3BQ96NL0 473 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 ACCSQ96QU6 501 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 CDC42EP4Q9H3Q1 356 aaKnown RBP11.71□□□□□ -0.53
CDH4-201ENST00000543233 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 ZFYVE28Q9HCC9 887 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 KIAA1257Q9ULG3 409 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDH4-201ENST00000543233 NEU2Q9Y3R4 380 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 MYH11P35749 1972 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 SGPL1O95470 568 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 MSL3P1P0C860 447 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 HOXA7P31268 230 aaPredicted RBP11.71□□□□□ -0.53
CDH4-201ENST00000543233 GPC3P51654 580 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 NCKAP1LP55160 1127 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 MOGSQ13724 837 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 GRM2Q14416 872 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 FBXL19Q6PCT2 694 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
CDH4-201ENST00000543233 TEPSINQ96N21 525 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 COQ7Q99807 217 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 QPCTLQ9NXS2 382 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 GPRC5DQ9NZD1 345 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 AMFRQ9UKV5 643 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 GPSM3Q9Y4H4 160 aa11.71□□□□□ -0.53
CDH4-201ENST00000543233 GOLGA8CPA6NN73 597 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 GMNNO75496 209 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 FTLP02792 175 aaPredicted RBP11.71□□□□□ -0.54
CDH4-201ENST00000543233 ENO1P06733 434 aaKnown RBP11.71□□□□□ -0.54
CDH4-201ENST00000543233 PLS3P13797 630 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 HMOX2P30519 316 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 MARCKSL1P49006 195 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 TUBA4AP68366 448 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 CETN1Q12798 172 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 CYP2A13Q16696 494 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 TIGD2Q4W5G0 525 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 MFSD5Q6N075 450 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 AMIGO2Q86SJ2 522 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 DHDDSQ86SQ9 333 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 Q8N9G6 341 aaPredicted RBP11.71□□□□□ -0.54
CDH4-201ENST00000543233 LRRC57Q8N9N7 239 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 POMGNT1Q8WZA1 660 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 C18orf8Q96DM3 657 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 MRPS26Q9BYN8 205 aaKnown RBP11.71□□□□□ -0.54
CDH4-201ENST00000543233 GPR88Q9GZN0 384 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 PCDH12Q9NPG4 1184 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 C6orf203Q9P0P8 240 aaPredicted RBP11.71□□□□□ -0.54
CDH4-201ENST00000543233 SEPT9Q9UHD8 586 aaPredicted RBP11.71□□□□□ -0.54
CDH4-201ENST00000543233 POU2F3Q9UKI9 436 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 PCDHGA8Q9Y5G5 932 aa11.71□□□□□ -0.54
CDH4-201ENST00000543233 GSTTP1A0A1W2PQM5 241 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 FAM47DPA6NHR8 397 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms