RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 SPOPO43791 374 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 DAB1O75553 588 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 LTFP02788 710 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 COMTP21964 271 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 SDC4P31431 198 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 MAN1A1P33908 653 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 FLT3P36888 993 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 SLC1A1P43005 524 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 ZNF143P52747 638 aaPredicted RBP11.18□□□□□ -0.62
DDB1-221ENST00000543162 EPHB3P54753 998 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 USP46P62068 366 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 OGDHQ02218 1023 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 ZNF252P-AS1Q0IIN9 211 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 TWF1Q12792 350 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 PLD1Q13393 1074 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 TAF12Q16514 161 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 PTPROQ16827 1216 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 HFE2Q6ZVN8 426 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 BHLHA9Q7RTU4 235 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 NT5DC3Q86UY8 548 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 ARHGAP18Q8N392 663 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 NIPA2Q8N8Q9 360 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 SLC7A14Q8TBB6 771 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 GDPD5Q8WTR4 605 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 UBE2Q2Q8WVN8 375 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 FBXO32Q969P5 355 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 CNPY3Q9BT09 278 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 POPDC2Q9HBU9 364 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDB1-221ENST00000543162 IL37Q9NZH6 218 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 FBXW11Q9UKB1 542 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 USTQ9Y2C2 406 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 HYOU1Q9Y4L1 999 aa11.18□□□□□ -0.62
DDB1-221ENST00000543162 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 DPYSL4O14531 572 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 ENC1O14682 589 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 CAPN9O14815 690 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 NCK2O43639 380 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
DDB1-221ENST00000543162 RNF8O76064 485 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 C1RP00736 705 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 ATP1A1P05023 1023 aaKnown RBP11.17□□□□□ -0.62
DDB1-221ENST00000543162 CSH1P0DML2 217 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 CSH2P0DML3 217 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 NOS2P35228 1153 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 MATKP42679 507 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 SSR1P43307 286 aaKnown RBP11.17□□□□□ -0.62
DDB1-221ENST00000543162 PTPN9P43378 593 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 CLCN4P51793 760 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 YWHAGP61981 247 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDB1-221ENST00000543162 MTMR3Q13615 1198 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 ACAP1Q15027 740 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 RPS6KA1Q15418 735 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 CCDC14Q49A88 953 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 DCAF6Q58WW2 860 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 MEI1Q5TIA1 1274 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 BSPRYQ5W0U4 402 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 TRNP1Q6NT89 227 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 ITIH5Q86UX2 942 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 MON1AQ86VX9 555 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 DEFB106AQ8N104 65 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 CFAP57Q96MR6 1250 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 SLITRK1Q96PX8 696 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 SLC2A13Q96QE2 648 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 DDX23Q9BUQ8 820 aaKnown RBP11.17□□□□□ -0.62
DDB1-221ENST00000543162 TTLL2Q9BWV7 592 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 GMIPQ9P107 970 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 STAP1Q9ULZ2 295 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 MAGED2Q9UNF1 606 aaPredicted RBP11.17□□□□□ -0.62
DDB1-221ENST00000543162 MYO7AQ13402 2215 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 MYO16Q9Y6X6 1858 aa11.17□□□□□ -0.62
DDB1-221ENST00000543162 GREB1Q4ZG55 1949 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 A0A1W2PPC1 479 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 A0A1W2PQH9 124 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 FAM92AA1XBS5 289 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 EPOPA6NHQ4 379 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 MIF4GDA9UHW6 222 aaKnown RBP11.16□□□□□ -0.62
DDB1-221ENST00000543162 FANCGO15287 622 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 LRG1P02750 347 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 FYNP06241 537 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 C8AP07357 584 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 NCAM1P13591 858 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 DNA2P51530 1060 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 ATP11AP98196 1134 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 TAF10Q12962 218 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 CDO1Q16878 200 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 C15orf59Q2T9L4 293 aaPredicted RBP11.16□□□□□ -0.62
DDB1-221ENST00000543162 SLC25A52Q3SY17 297 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 BTBD8Q5XKL5 378 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 CC2D1AQ6P1N0 951 aaPredicted RBP11.16□□□□□ -0.62
DDB1-221ENST00000543162 ELMSAN1Q6PJG2 1045 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 RTL10Q7L3V2 364 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 BEND5Q7L4P6 421 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 CPNE8Q86YQ8 564 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 UBL4BQ8N7F7 174 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 SLC22A17Q8WUG5 538 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 EDEM1Q92611 657 aa11.16□□□□□ -0.62
DDB1-221ENST00000543162 NCAPGQ9BPX3 1015 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms