RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 BANF1O75531 89 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 CSDE1O75534 798 aaKnown RBP8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 TGFB3P10600 412 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 RALBP11234 206 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 GMPSP49915 693 aaPredicted RBP8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 ATXN3P54252 364 aaPredicted RBP8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 RTP1P59025 263 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 IRGCQ6NXR0 463 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 C16orf89Q6UX73 402 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 ZC3H3Q8IXZ2 948 aaKnown RBP8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 HIC2Q96JB3 615 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 MRPL1Q9BYD6 325 aaKnown RBP8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC39A10Q9ULF5 831 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 COQ4Q9Y3A0 265 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 NHSL1Q5SYE7 1610 aa8.5□□□□□ -1.05
PRKAB1-207ENST00000542698 EEF2KO00418 725 aaKnown RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 TCN1P20061 433 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 DSG3P32926 999 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 GNL1P36915 607 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 MAPRE2Q15555 327 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC1A5Q15758 541 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 DENND1BQ6P3S1 775 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 METTL7BQ6UX53 244 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 POLNQ7Z5Q5 900 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 SETD3Q86TU7 594 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 FAM13CQ8NE31 585 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ZSWIM2Q8NEG5 633 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 DNERQ8NFT8 737 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 SPDYE1Q8NFV5 336 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 SPOCK2Q92563 424 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC10A4Q96EP9 437 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 HAUS8Q9BT25 410 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 WRAP73Q9P2S5 460 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 COL18A1P39060 1754 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 FAM237BA0A1B0GVD1 139 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 A8MUI8 341 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ACKR2O00590 384 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 CCNE2O96020 404 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 APOEP02649 317 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 CPA3P15088 417 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 DPEP1P16444 411 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 RBL1P28749 1068 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 PTP4A2Q12974 167 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 GALNT4Q8N4A0 578 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC25A41Q8N5S1 370 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ASAP3Q8TDY4 903 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 PTPRN2Q92932 1015 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 LRRC39Q96DD0 335 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 CCDC138Q96M89 665 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 TBCBQ99426 244 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 LRMDAQ9H2I8 198 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 MMADHCQ9H3L0 296 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 TMEM134Q9H6X4 195 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 KCNK4Q9NYG8 393 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 CPSF3Q9UKF6 684 aaKnown RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 TSPAN16Q9UKR8 245 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 POLIQ9UNA4 740 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 RPL26L1Q9UNX3 145 aaKnown RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 A0A0B4J269 797 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 PRPF4O43172 522 aaKnown RBP eCLIP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 DGKIO75912 1065 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 CHEK2O96017 543 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ASS1P00966 412 aaKnown RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 THRAP10827 490 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 TGM2P21980 687 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 RPS12P25398 132 aaKnown RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ATICP31939 592 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 NUDT2P50583 147 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 NDST1P52848 882 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 PRAMEP78395 509 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC12A1Q13621 1099 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 FLOT2Q14254 428 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 KDELC2Q7Z4H8 507 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 FAM131BQ86XD5 332 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 RNF168Q8IYW5 571 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ZNF184Q99676 751 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 MAGEB5Q9BZ81 275 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 ZNF212Q9UDV6 495 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 LGALS13Q9UHV8 139 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 BARX2Q9UMQ3 279 aaPredicted RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 AP4E1Q9UPM8 1137 aa8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 FNDC3AQ9Y2H6 1198 aaKnown RBP8.49□□□□□ -1.05
PRKAB1-207ENST00000542698 MTSS1O43312 755 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 TBC1D12O60347 775 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 PSMG1O95456 288 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC25A27O95847 323 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 CD4P01730 458 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 HMGCRP04035 888 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 CYP2F1P24903 491 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SATB1Q01826 763 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 CNTN2Q02246 1040 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 CCDC15Q0P6D6 951 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 VSTM1Q6UX27 236 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ZCCHC23Q6ZST2 131 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 CLNKQ7Z7G1 428 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 POU5F2Q8N7G0 328 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms