RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 SLC9A4Q6AI14 798 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 C1orf228Q6PIY5 440 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 PQLC3Q8N755 202 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 SLC35F5Q8WV83 523 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 MRPL45Q9BRJ2 306 aaKnown RBP13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 PCDH18Q9HCL0 1135 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 PNPLA8Q9NP80 782 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 CYLDQ9NQC7 956 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 SCN1AP35498 2009 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 IQANK1A0A1B0GTG1 560 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 BCLAF3A2AJT9 711 aaKnown RBP13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 MDM4O15151 490 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 FGFR1P11362 822 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 HOXD8P13378 290 aaPredicted RBP13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 SDC4P31431 198 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 SNX16P57768 344 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 ATP11AP98196 1134 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 SETDB1Q15047 1291 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 LDLRAD1Q5T700 205 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 APBB1IPQ7Z5R6 666 aaPredicted RBP13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 SESTD1Q86VW0 696 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 ZDHHC17Q8IUH5 632 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 ZNF276Q8N554 614 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 STK32AQ8WU08 396 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 FAM172AQ8WUF8 416 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 C10orf82Q8WW14 230 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 SLC44A1Q8WWI5 657 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 FAF2Q96CS3 445 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 MYLK2Q9H1R3 596 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 BAIAP2L1Q9UHR4 511 aa13.81□□□□□ -0.2
PRKAB1-206ENST00000541640 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 TCRBV9S1A1TA0A576 114 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 KBTBD13C9JR72 458 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 DCTN3O75935 186 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ATP5HO75947 161 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 NPTXRO95502 500 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 DESP17661 470 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ADRA1DP25100 572 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ALDH3A1P30838 453 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 MAGEA6P43360 314 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 MTM1Q13496 603 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 SCYL2Q6P3W7 929 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 OTOAQ7RTW8 1153 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ACOT1Q86TX2 421 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 LRRC52Q8N7C0 313 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 PCDH19Q8TAB3 1148 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 TCP10LQ8TDR4 215 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 SNX27Q96L92 541 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ZNF670Q9BS34 389 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 SNRNP25Q9BV90 132 aaKnown RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 VPS11Q9H270 941 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 RRAGCQ9HB90 399 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 NGRNQ9NPE2 291 aaKnown RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 TXLNGQ9NUQ3 528 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 CHKBQ9Y259 395 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 NME7Q9Y5B8 376 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 SNX9Q9Y5X1 595 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 KCNN4O15554 427 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 PAPSS1O43252 624 aaPredicted RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 STRNO43815 780 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 PIAS1O75925 651 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 SNAI1O95863 264 aaPredicted RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 BCAR1P56945 870 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ZNF200P98182 395 aaPredicted RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 SEPT7Q16181 437 aaKnown RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ARHGAP17Q68EM7 881 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 UNC93AQ86WB7 457 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ZNF398Q8TD17 642 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 ZMAT2Q96NC0 199 aaKnown RBP13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 LRRC37BQ96QE4 947 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 CXCL16Q9H2A7 254 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 RAB6BQ9NRW1 208 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 GPATCH2LQ9NWQ4 482 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 HESX1Q9UBX0 185 aa13.8□□□□□ -0.2
PRKAB1-206ENST00000541640 KAT6AQ92794 2004 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 PPEF2O14830 753 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 GABBR2O75899 941 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 MT-ND3P03897 115 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 MMP3P08254 477 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 KRT16P08779 473 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 RBL1P28749 1068 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 HOXA11P31270 313 aaPredicted RBP13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 YWHAZP63104 245 aaKnown RBP13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 SLC18A2Q05940 514 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 PTK7Q13308 1070 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 KBTBD12Q3ZCT8 623 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 SPDYAQ5MJ70 313 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 SCUBE3Q8IX30 993 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 ERP27Q96DN0 273 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 ADAMTS10Q9H324 1103 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 SNTG2Q9NY99 539 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 IKBKGQ9Y6K9 419 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 PDCD11Q14690 1871 aaKnown RBP13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 ZBED1O96006 694 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 PTPN9P43378 593 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 HDAC4P56524 1084 aa13.79□□□□□ -0.2
PRKAB1-206ENST00000541640 YWHAGP61981 247 aaKnown RBP eCLIP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms