RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 MT-CO3P00414 261 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 BCAT1P54687 386 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 MESP2Q0VG99 397 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 NTRK3Q16288 839 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 CFAP221Q4G0U5 840 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 HAUS3Q68CZ6 603 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 ZPBP2Q6X784 338 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 PIK3AP1Q6ZUJ8 805 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 SPATA2LQ8IUW3 424 aaPredicted RBP10.12□□□□□ -0.79
YBX3-211ENST00000541351 CCDC83Q8IWF9 413 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 NAT16Q8N8M0 369 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 STKLD1Q8NE28 680 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 HPS3Q969F9 1004 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 PHF12Q96QT6 1004 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 DUSP9Q99956 384 aaKnown RBP10.12□□□□□ -0.79
YBX3-211ENST00000541351 PYM1Q9BRP8 204 aaKnown RBP10.12□□□□□ -0.79
YBX3-211ENST00000541351 CD248Q9HCU0 757 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 BRMS1Q9HCU9 246 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.12□□□□□ -0.79
YBX3-211ENST00000541351 DNAJC17Q9NVM6 304 aaKnown RBP10.12□□□□□ -0.79
YBX3-211ENST00000541351 WDR35Q9P2L0 1181 aa10.12□□□□□ -0.79
YBX3-211ENST00000541351 USP9YO00507 2555 aaPredicted RBP10.11□□□□□ -0.79
YBX3-211ENST00000541351 H0YCG3 227 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 MBL2P11226 248 aaPredicted RBP10.11□□□□□ -0.79
YBX3-211ENST00000541351 ELAVL4P26378 380 aaKnown RBP10.11□□□□□ -0.79
YBX3-211ENST00000541351 CD27P26842 260 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 ANXA13P27216 316 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 TXKP42681 527 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 NPTX2P47972 431 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SMTNP53814 917 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 PEX3P56589 373 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 CLDN6P56747 220 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 RACK1P63244 317 aaKnown RBP10.11□□□□□ -0.79
YBX3-211ENST00000541351 IL9RQ01113 521 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 MCL1Q07820 350 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
YBX3-211ENST00000541351 ARL13BQ3SXY8 428 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 TSGA10IPQ3SY00 556 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SV2CQ496J9 727 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SDHAF4Q5VUM1 108 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 C9orf57Q5W0N0 161 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 IGF2-ASQ6U949 168 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 C4orf50Q6ZRC1 276 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 DENND5BQ6ZUT9 1274 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 LRRTM3Q86VH5 581 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 CATSPER3Q86XQ3 398 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SCN4BQ8IWT1 228 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 EID2Q8N6I1 236 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 BRF1Q92994 677 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 VCPIP1Q96JH7 1222 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 ZNF560Q96MR9 790 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SLITRK1Q96PX8 696 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 CCNL2Q96S94 520 aaPredicted RBP10.11□□□□□ -0.79
YBX3-211ENST00000541351 ACBD6Q9BR61 282 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 CCSER1Q9C0I3 900 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SPHK2Q9NRA0 654 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 EVA1BQ9NVM1 165 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 ARHGAP28Q9P2N2 729 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 SSUH2Q9Y2M2 353 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.11□□□□□ -0.79
YBX3-211ENST00000541351 DERAQ9Y315 318 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 RAD54BQ9Y620 910 aa10.11□□□□□ -0.79
YBX3-211ENST00000541351 OBSL1O75147 1896 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 SPTBN1Q01082 2364 aaKnown RBP10.1□□□□□ -0.79
YBX3-211ENST00000541351 BLACEA4D250 179 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 CLEC18AA5D8T8 446 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 VILLO15195 856 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 NEMFO60524 1076 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 GJB6O95452 261 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 MPOP05164 745 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 ACP1P24666 158 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 CYP2F1P24903 491 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 PCSK1P29120 753 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 GRIK1P39086 918 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 PNPLA4P41247 253 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
YBX3-211ENST00000541351 MAGEA11P43364 429 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 TRAPPC10P48553 1259 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 GPR15P49685 360 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 INSM1Q01101 510 aaPredicted RBP10.1□□□□□ -0.79
YBX3-211ENST00000541351 SPAG1Q07617 926 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 TMEM132DQ14C87 1099 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 FUT11Q495W5 492 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 SLC45A4Q5BKX6 768 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 WSCD1Q658N2 575 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 VSTM1Q6UX27 236 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 CLEC18BQ6UXF7 455 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 USP53Q70EK8 1073 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 GATAD2AQ86YP4 633 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 TMEM86AQ8N2M4 240 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 EXD3Q8N9H8 876 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 CLEC18CQ8NCF0 446 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 SAP25Q8TEE9 199 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 BICD1Q96G01 975 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 SPATA17Q96L03 361 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 SLC6A17Q9H1V8 727 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 GDF3Q9NR23 364 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms