RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SLC7A5P2Q9GIP4 190 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 CCDC68Q9H2F9 335 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 RPAP3Q9H6T3 665 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 GBA2Q9HCG7 927 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 IGSF9Q9P2J2 1179 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 KLHL3Q9UH77 587 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 PADI4Q9UM07 663 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 RABGAP1Q9Y3P9 1069 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 ALG6Q9Y672 507 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 A0A1B0GTW7 788 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 S100BP04271 92 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 EIF2S1P05198 315 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 FAM58BPP0C7Q3 252 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 MYL2P10916 166 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 RAG1P15918 1043 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 IVDP26440 423 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 IRX4P78413 519 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 CREB5Q02930 508 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 KCNH2Q12809 1159 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SIX1Q15475 284 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 CYP2A13Q16696 494 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 OGFRL1Q5TC84 451 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SEL1L2Q5TEA6 688 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SV2BQ7L1I2 683 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 LRRC49Q8IUZ0 686 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 BLIDQ8IZY5 108 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 UBL4BQ8N7F7 174 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SGF29Q96ES7 293 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 TSSK1BQ9BXA7 367 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 UNKQ9C0B0 810 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SH3GLB2Q9NR46 395 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 OLFML3Q9NRN5 406 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 FEM1BQ9UK73 627 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 AJAP1Q9UKB5 411 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 COG5Q9UP83 839 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 AP4B1Q9Y6B7 739 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 TLL2Q9Y6L7 1015 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 EMSYQ7Z589 1322 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 A0A1W2PPM1 405 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SMCO2A6NFE2 343 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 ARHGAP42A6NI28 874 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 TTC34A8MYJ7 566 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 POC1B-GALNT4F8VUJ3 575 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 TRPA1O75762 1119 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SULT1C4O75897 302 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 CHRNB1P11230 501 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 ZNF23P17027 643 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SERPINB6P35237 376 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 TUBA4AP68366 448 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 CNGA3Q16281 694 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 CYP4F22Q6NT55 531 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 FOXR2Q6PJQ5 311 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 ZSWIM1Q9BR11 485 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SLC39A3Q9BRY0 314 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 MANSC1Q9H8J5 431 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 ZFYVE28Q9HCC9 887 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 SENP1Q9P0U3 644 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 TAGLN3Q9UI15 199 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 RAB26Q9ULW5 256 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 ERVK-11Q9UQG0 969 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 PCDHA1Q9Y5I3 950 aa9.84□□□□□ -0.83
CTNNA1-243ENST00000540387 MIF4GDA9UHW6 222 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 PLA2G6O60733 806 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 POLR2MP0CAP2 368 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 UBL4AP11441 157 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 POLR2EP19388 210 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 GJA5P36382 358 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 ALDH1A3P47895 512 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 ALDH3B2P48448 385 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 WASHC5Q12768 1159 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 HIC1Q14526 733 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 TRIP13Q15645 432 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 WDR45BQ5MNZ6 344 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 RABGAP1LQ5R372 815 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 FAM160B2Q86V87 743 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 SLC13A5Q86YT5 568 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 GLYCTKQ8IVS8 523 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 C2orf69Q8N8R5 385 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 PCYOX1LQ8NBM8 494 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 SLC30A5Q8TAD4 765 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 OLIG1Q8TAK6 271 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 C12orf42Q96LP6 360 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 AK8Q96MA6 479 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 CEP63Q96MT8 703 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 DCUN1D5Q9BTE7 237 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 ADAM33Q9BZ11 813 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 SACM1LQ9NTJ5 587 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 TYW1Q9NV66 732 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 ANAPC5Q9UJX4 755 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 GSTTP1A0A1W2PQM5 241 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 TEX28O15482 410 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 SIN3BO75182 1162 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 MARSP56192 900 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 OASLQ15646 514 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 EDRF1Q3B7T1 1238 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 TTC30AQ86WT1 665 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 TRIML2Q8N7C3 387 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 C12orf50Q8NA57 414 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms