RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SPAG6O75602 509 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 MRPL28Q13084 256 aaKnown RBP11.46□□□□□ -0.57
PBX1-212ENST00000540236 ALCAMQ13740 583 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 DSG4Q86SJ6 1040 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 MCF2L2Q86YR7 1114 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 UBE2J2Q8N2K1 259 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 SNX31Q8N9S9 440 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 LRTOMTQ8WZ04 291 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 EBF4Q9BQW3 602 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 EDEM3Q9BZQ6 932 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 BLOC1S4Q9NUP1 217 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 RAD17O75943 681 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 TM7SF2O76062 418 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 ZNF23P17027 643 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 HSPA13P48723 471 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 CCNG1P51959 295 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 WDR45BQ5MNZ6 344 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 PPM1LQ5SGD2 360 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 ZFYVE28Q9HCC9 887 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 C6orf203Q9P0P8 240 aaPredicted RBP11.46□□□□□ -0.57
PBX1-212ENST00000540236 GRID1Q9ULK0 1009 aa11.46□□□□□ -0.57
PBX1-212ENST00000540236 CYB561D2O14569 222 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 TFECO14948 347 aaPredicted RBP11.46□□□□□ -0.58
PBX1-212ENST00000540236 DBTP11182 482 aaKnown RBP11.46□□□□□ -0.58
PBX1-212ENST00000540236 HOXA13P31271 388 aaPredicted RBP11.46□□□□□ -0.58
PBX1-212ENST00000540236 RFX5P48382 616 aaPredicted RBP11.46□□□□□ -0.58
PBX1-212ENST00000540236 CTSWP56202 376 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 ZNF423Q2M1K9 1284 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 SYN2Q92777 582 aaPredicted RBP11.46□□□□□ -0.58
PBX1-212ENST00000540236 C12orf43Q96C57 262 aaKnown RBP11.46□□□□□ -0.58
PBX1-212ENST00000540236 CRAMP1Q96RY5 1269 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 EYA3Q99504 573 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 PNPOQ9NVS9 261 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 A0A1W2PQ67 120 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 USP17L5A8MUK1 530 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 BAIAP3O94812 1187 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 PRKACAP17612 351 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 SLCO6A1Q86UG4 719 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 C1orf50Q9BV19 199 aa11.46□□□□□ -0.58
PBX1-212ENST00000540236 IGSF1Q8N6C5 1336 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 CNTNAP5Q8WYK1 1306 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 ATP7AQ04656 1500 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.45□□□□□ -0.58
PBX1-212ENST00000540236 TLR3O15455 904 aaKnown RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 NOL4O94818 638 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 CCNA2P20248 432 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 SERPINB10P48595 397 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 TTC13Q8NBP0 860 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 FANCEQ9HB96 536 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 F7P08709 466 aaPredicted RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 GTF2IP78347 998 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 SLC22A16Q86VW1 577 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 ERI1Q8IV48 349 aaKnown RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 SEPHS2Q99611 448 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 REEP2Q9BRK0 252 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 CCDC28BQ9BUN5 200 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 MRPL40Q9NQ50 206 aaKnown RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 TSR3Q9UJK0 312 aaKnown RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 RGL2O15211 777 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 TIPRLO75663 272 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 CHRNB1P11230 501 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 ENDOUP21128 410 aaKnown RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 PTGIRP43119 386 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 NIPAL1Q6NVV3 410 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 ZC3H7AQ8IWR0 971 aaKnown RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 FBXW8Q8N3Y1 598 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 MCRS1Q96EZ8 462 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 RUSC1Q9BVN2 902 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 STN1Q9H668 368 aaKnown RBP11.45□□□□□ -0.58
PBX1-212ENST00000540236 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 SENP1Q9P0U3 644 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 APEX2Q9UBZ4 518 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 A0A1W2PPW3 197 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 RBP3P10745 1247 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 CD300CQ08708 224 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 FIGNQ5HY92 759 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 C1orf112Q9NSG2 853 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 GIT1Q9Y2X7 761 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 MYH6P13533 1939 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 VILLO15195 856 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 ASNSP08243 561 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 PSMB9P28065 219 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 GRIA2P42262 883 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 FMO5P49326 533 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 GPR162Q16538 588 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 NDUFA5Q16718 116 aa11.45□□□□□ -0.58
PBX1-212ENST00000540236 SNAP47Q5SQN1 464 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms