RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 EP400NLQ6ZTU2 488 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 DAAM2Q86T65 1068 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 ARFGAP1Q8N6T3 406 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 ATAD1Q8NBU5 361 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 C3orf20Q8ND61 904 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 COG1Q8WTW3 980 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 KCTD13Q8WZ19 329 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 KRT35Q92764 455 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 PGLYRP2Q96PD5 576 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 MCEEQ96PE7 176 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 ALS2CR12Q96Q35 445 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 CLSTN3Q9BQT9 956 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 ZBED2Q9BTP6 218 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 TTPALQ9BTX7 342 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 SELENOOQ9BVL4 669 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 DNAI2Q9GZS0 605 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 SYNCQ9H7C4 482 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 CSNK1G1Q9HCP0 422 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 PARVAQ9NVD7 372 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 SPG21Q9NZD8 308 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 EHD2Q9NZN4 543 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 AMFRQ9UKV5 643 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 SLC27A5Q9Y2P5 690 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 JRKLQ9Y4A0 524 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
RTN4IP1-204ENST00000539449 DMXL1Q9Y485 3027 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 ATG2AQ2TAZ0 1938 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 MTMR11A4FU01 709 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 OR6C75A6NL08 312 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 F8VP50 259 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 PDE2AO00408 941 aaPredicted RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 PROSCO94903 275 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 KRT3P12035 628 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 TFE3P19532 575 aaPredicted RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 AVPR2P30518 371 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 FLT3P36888 993 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 NBL1P41271 181 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 RNASE9P60153 205 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 ADIGQ0VDE8 80 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 SMAD2Q15796 467 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 PSMD5Q16401 504 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 IFI16Q16666 785 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 USP41Q3LFD5 358 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 RAB41Q5JT25 222 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 FAM102AQ5T9C2 384 aaPredicted RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 SH3PXD2AQ5TCZ1 1133 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 C11orf63Q6NUN7 778 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 BHLHA9Q7RTU4 235 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 DGLUCYQ7Z3D6 616 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 PEX26Q7Z412 305 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 DDX53Q86TM3 631 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 SPATA2LQ8IUW3 424 aaPredicted RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 DCP1BQ8IZD4 617 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 KLHL23Q8NBE8 558 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 FBXO22Q8NEZ5 403 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 IPO4Q8TEX9 1081 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 RXFP2Q8WXD0 754 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 PIK3R5Q8WYR1 880 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 CD101Q93033 1021 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 SMARCD1Q96GM5 515 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 MS4A14Q96JA4 679 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 HSFY1Q96LI6 401 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 RAD9AQ99638 391 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 ADAM33Q9BZ11 813 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 ULBP1Q9BZM6 244 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 MRPL47Q9HD33 250 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 ABI2Q9NYB9 513 aaPredicted RBP9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 SMARCAL1Q9NZC9 954 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 WDR35Q9P2L0 1181 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 MTRRQ9UBK8 725 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 STRIP2Q9ULQ0 834 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 SNX12Q9UMY4 172 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 USTQ9Y2C2 406 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 INSL6Q9Y581 213 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 CDY1Q9Y6F8 540 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 SCINQ9Y6U3 715 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 CFAP47Q6ZTR5 3102 aa9.63□□□□□ -0.87
RTN4IP1-204ENST00000539449 MAP1BP46821 2468 aaKnown RBP9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 WDR27A2RRH5 827 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 LINC01553A4QN01 128 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 H7C4K7 107 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 MYO1FO00160 1098 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 LILRB3O75022 631 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 FGF18O76093 207 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 SEC24AO95486 1093 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 CPB1P15086 417 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 OR1D2P34982 312 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 ACADSBP45954 432 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 GLUD2P49448 558 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 PGFP49763 221 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 PEX5P50542 639 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 TKTL1P51854 596 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 PITX1P78337 314 aaPredicted RBP9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 ZXDAP98168 799 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 ROR1Q01973 937 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms