RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 ULBP1Q9BZM6 244 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 DCLK3Q9C098 648 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 DNAI2Q9GZS0 605 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 DPH5Q9H2P9 285 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 LRRC4Q9HBW1 653 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 MTUS1Q9ULD2 1270 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 LRFN2Q9ULH4 789 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 NLRC5Q86WI3 1866 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 YJEFN3A6XGL0 299 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 E7ENQ6 273 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 OAZ2O95190 189 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 CLTBP09497 229 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 USP17L7P0C7H9 530 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 MCM3P25205 808 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 SDC4P31431 198 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 ARSEP51690 589 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TAZQ16635 292 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 HADHQ16836 314 aaKnown RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 DUPD1Q68J44 220 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 SCYL2Q6P3W7 929 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TAS1R1Q7RTX1 841 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 DEFB106AQ8N104 65 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 SPATA18Q8TC71 538 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 RUBCNQ92622 972 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 CENPIQ92674 756 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 FAM149B1Q96BN6 582 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 SMARCD1Q96GM5 515 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 RBM41Q96IZ5 413 aaKnown RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TBCBQ99426 244 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 DDX23Q9BUQ8 820 aaKnown RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 DDX56Q9NY93 547 aaKnown RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 ADAM28Q9UKQ2 775 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 MICAL3Q7RTP6 2002 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 ALDH2P05091 517 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 GALTP07902 379 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 KRT7P08729 469 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 CYP2F1P24903 491 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 SCNN1AP37088 669 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 SLC8A3P57103 927 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 SNX16P57768 344 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 GPS2Q13227 327 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
CTCFL-212ENST00000539382 FAM171A1Q5VUB5 890 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 RSPO2Q6UXX9 243 aaPredicted RBP11.61□□□□□ -0.55
CTCFL-212ENST00000539382 PRUNE1Q86TP1 453 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 CEP57Q86XR8 500 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 CCDC105Q8IYK2 499 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 STKLD1Q8NE28 680 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 HAUS1Q96CS2 278 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 ERP44Q9BS26 406 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 C11orf49Q9H6J7 331 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
CTCFL-212ENST00000539382 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.61□□□□□ -0.55
CTCFL-212ENST00000539382 COL4A6Q14031 1691 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
CTCFL-212ENST00000539382 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 ENDOD1O94919 500 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 CSF2RAP15509 400 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 PAX3P23760 479 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 IL4RP24394 825 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 PTPN7P35236 360 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 MATKP42679 507 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 PTPN9P43378 593 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 PGFP49763 221 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 DAOAP59103 153 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 YWHAZP63104 245 aaKnown RBP11.61□□□□□ -0.55
CTCFL-212ENST00000539382 DYNLT1P63172 113 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 DHX34Q14147 1143 aaKnown RBP11.61□□□□□ -0.55
CTCFL-212ENST00000539382 SLC39A12Q504Y0 691 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 DCAF6Q58WW2 860 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 ARCQ7LC44 396 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 SIX6OS1Q8N1H7 587 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 THEM5Q8N1Q8 247 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 TTC9BQ8N6N2 239 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 SCAMP5Q8TAC9 235 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 TMPRSS4Q9NRS4 437 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 NAALADL1Q9UQQ1 740 aa11.61□□□□□ -0.55
CTCFL-212ENST00000539382 PTPRDP23468 1912 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 TP73O15350 636 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 TNNT3P45378 269 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-212ENST00000539382 FNTAP49354 379 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 GYS2P54840 703 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 COPS2P61201 443 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 MRPL58Q14197 206 aaKnown RBP11.6□□□□□ -0.55
CTCFL-212ENST00000539382 PPP2R5EQ16537 467 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 CCNG2Q16589 344 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 MAP9Q49MG5 647 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
CTCFL-212ENST00000539382 CCDC185Q8N715 623 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 KCTD6Q8NC69 237 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 TSEN2Q8NCE0 465 aaKnown RBP11.6□□□□□ -0.55
CTCFL-212ENST00000539382 NT5C3BQ969T7 300 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 SNRNP25Q9BV90 132 aaKnown RBP11.6□□□□□ -0.55
CTCFL-212ENST00000539382 ZCWPW1Q9H0M4 648 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.55
CTCFL-212ENST00000539382 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-212ENST00000539382 DNPEPQ9ULA0 475 aa11.6□□□□□ -0.55
CTCFL-212ENST00000539382 FAN1Q9Y2M0 1017 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms