RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TJP2Q9UDY2 1190 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 MARK3P27448 753 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 MIPP30301 263 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ATICP31939 592 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 PCK1P35558 622 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ADCYAP1R1P41586 468 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 EIF3EP60228 445 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 EEF1DP3Q658K8 133 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 UNC45BQ8IWX7 931 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 AGGF1Q8N302 714 aaeCLIP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 SLC4A11Q8NBS3 891 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 C10orf82Q8WW14 230 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ERP27Q96DN0 273 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 MRRFQ96E11 262 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 TMEM237Q96Q45 408 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 CDT1Q9H211 546 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 VPS11Q9H270 941 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 VRTNQ9H8Y1 702 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 CYP3A43Q9HB55 503 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 NOP53Q9NZM5 478 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 XPO7Q9UIA9 1087 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 SIX4Q9UIU6 781 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 MYADML2A6NDP7 307 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 INO80B-WBP1J3KQ70 363 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 NOP56O00567 594 aaKnown RBP15.16■□□□□ 0.02
CDCA3-207ENST00000538862 CILPO75339 1184 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 ENDOD1O94919 500 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 KRT19P08727 400 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 CD48P09326 243 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 ELF1P32519 619 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 RAP1GAPP47736 663 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 RASSF2P50749 326 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 OSTNP61366 133 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 GAD2Q05329 585 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 DPYSL3Q14195 570 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 LRRC26Q2I0M4 334 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 HSDL1Q3SXM5 330 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 C7orf61Q8IZ16 206 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 EMC1Q8N766 993 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 ARRDC4Q8NCT1 418 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 DCAKDQ8WVC6 231 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 TMEM176AQ96HP8 235 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 CYTH2Q99418 400 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 WDR83Q9BRX9 315 aaKnown RBP15.16■□□□□ 0.02
CDCA3-207ENST00000538862 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 INO80BQ9C086 356 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-207ENST00000538862 SDCBP2Q9H190 292 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 CXorf56Q9H5V9 222 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 USP18Q9UMW8 372 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 TRIM33Q9UPN9 1127 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 STK38LQ9Y2H1 464 aa15.16■□□□□ 0.02
CDCA3-207ENST00000538862 KBTBD13C9JR72 458 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 C2CD2LO14523 706 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 MICAL2O94851 1124 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 TMEM63AO94886 807 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 ARIH2O95376 493 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 ANP32DO95626 131 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 CXCL8P10145 99 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 RBP3P10745 1247 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 CDH8P55286 799 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 MBTD1Q05BQ5 628 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 SEPT7Q16181 437 aaKnown RBP15.15■□□□□ 0.02
CDCA3-207ENST00000538862 TMEM132AQ24JP5 1023 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 SLC45A4Q5BKX6 768 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 FYB2Q5VWT5 728 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 OTOAQ7RTW8 1153 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 BANPQ8N9N5 519 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 STAMBPL1Q96FJ0 436 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 FAM124BQ9H5Z6 455 aaPredicted RBP15.15■□□□□ 0.02
CDCA3-207ENST00000538862 C10orf88Q9H8K7 445 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 PCSK1NQ9UHG2 260 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDCA3-207ENST00000538862 L3MBTL1Q9Y468 752 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 TCRBV7S3A2A0A539 114 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 B4GALT5O43286 388 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 HBP1O60381 514 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 ADAMTS4O75173 837 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 SPAG6O75602 509 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 VDRP11473 427 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 P4HA1P13674 534 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 GPD2P43304 727 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 ZNF143P52747 638 aaPredicted RBP15.15■□□□□ 0.02
CDCA3-207ENST00000538862 TNFAIP2Q03169 654 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 POU5F1BQ06416 359 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 EFTUD2Q15029 972 aaKnown RBP eCLIP15.15■□□□□ 0.025e-7■■□□□ 12.7
CDCA3-207ENST00000538862 BBS9Q3SYG4 887 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 FAM47CQ5HY64 1035 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 TAPT1Q6NXT6 567 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 TRIM50Q86XT4 487 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 ZNF276Q8N554 614 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 FAM71DQ8N9W8 422 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 SPATA18Q8TC71 538 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 NLRP4Q96MN2 994 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 MIS12Q9H081 205 aa15.15■□□□□ 0.02
CDCA3-207ENST00000538862 SMARCAD1Q9H4L7 1026 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms