RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 TMEM110Q86TL2 294 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 HOOK3Q86VS8 718 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 GLIS1Q8NBF1 620 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 OR6B3Q8NGW1 331 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 SNF8Q96H20 258 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 PEBP4Q96S96 227 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 BAIAP2L1Q9UHR4 511 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 SUFUQ9UMX1 484 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 CDY2AQ9Y6F7 541 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 FOXO6A8MYZ6 492 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 RGS16O15492 202 aaPredicted RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 ATP6V1G2O95670 118 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 GAS8O95995 478 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 RPSAP08865 295 aaKnown RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 RARGP13631 454 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 KDELR1P24390 212 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 ITGA8P53708 1063 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 MFSD14CQ5VZR4 134 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 SESTD1Q86VW0 696 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 CRYBG2Q8N1P7 616 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 CMASQ8NFW8 434 aaPredicted RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 RXFP2Q8WXD0 754 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 ABCF3Q9NUQ8 709 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 A8MXQ7 604 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 TK2O00142 265 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 ADAMTS4O75173 837 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 CHRNA1P02708 482 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 KRT7P08729 469 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 PDGFRBP09619 1106 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 GHRP10912 638 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 GPD1P21695 349 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 PRKCZQ05513 592 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 CALCOCO2Q13137 446 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 ACAP1Q15027 740 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 LRRC14Q15048 493 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 OASLQ15646 514 aaKnown RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 HADHQ16836 314 aaKnown RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 ZNF280DQ6N043 979 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 PIGWQ7Z7B1 504 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 TBC1D1Q86TI0 1168 aaPredicted RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 PGM2Q96G03 612 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 PPP1R10Q96QC0 940 aaKnown RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 NOD2Q9HC29 1040 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 INTS9Q9NV88 658 aaKnown RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 ABT1Q9ULW3 272 aaKnown RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 DRG1Q9Y295 367 aaKnown RBP11.23□□□□□ -0.61
CLIP1-210ENST00000538120 EFR3BQ9Y2G0 817 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 TRPV2Q9Y5S1 764 aa11.23□□□□□ -0.61
CLIP1-210ENST00000538120 PDCD11Q14690 1871 aaKnown RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 PAPSS1O43252 624 aaPredicted RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 RIPK2O43353 540 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 GRAP2O75791 330 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 VIMP08670 466 aaKnown RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 ZSCAN5DPP0CG00 497 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 SETSIPP0DME0 302 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 ATF2P15336 505 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 CREB1P16220 341 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 LRPAP1P30533 357 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 PCK1P35558 622 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 GNL1P36915 607 aaPredicted RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 ADCY8P40145 1251 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 VPS41P49754 854 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 TAF6P49848 677 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 CACNB2Q08289 660 aaPredicted RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 MGAT3Q09327 533 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 SLMAPQ14BN4 828 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 C15orf59Q2T9L4 293 aaPredicted RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 CCDC14Q49A88 953 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 TWF2Q6IBS0 349 aaKnown RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 ALLCQ8N6M5 410 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 GSTCDQ8NEC7 633 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 SLC35B2Q8TB61 432 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 NKD2Q969F2 451 aaPredicted RBP11.22□□□□□ -0.61
CLIP1-210ENST00000538120 HAUS1Q96CS2 278 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 ZFP42Q96MM3 310 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 PWWP2AQ96N64 755 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 CNPY3Q9BT09 278 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 RABGEF1Q9UJ41 708 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 USP18Q9UMW8 372 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 SLC12A4Q9UP95 1085 aa11.22□□□□□ -0.61
CLIP1-210ENST00000538120 SEPT4O43236 478 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 CCDC130P13994 396 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ETS1P14921 441 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 PDGFRAP16234 1089 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 RPL34P49207 117 aaKnown RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ARSEP51690 589 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 VCPP55072 806 aaKnown RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 LILRA4P59901 499 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 BBS12Q6ZW61 710 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 SERINC5Q86VE9 423 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 SCUBE3Q8IX30 993 aa11.21□□□□□ -0.61
CLIP1-210ENST00000538120 ZNF513Q8N8E2 541 aaPredicted RBP11.21□□□□□ -0.61
CLIP1-210ENST00000538120 MGARPQ8TDB4 240 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms