RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	THG1L	Q9NWX6	298 aa	Known RBP	11.44	□□□□□ -0.58
LDHA-215	ENST00000537296	TSPAN16	Q9UKR8	245 aa		11.44	□□□□□ -0.58
LDHA-215	ENST00000537296		A0A1W2PQH9	124 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296		O00370	1275 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	MDM4	O15151	490 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	MBL2	P11226	248 aa	Predicted RBP	11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	TRIM21	P19474	475 aa	Known RBP	11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	BRD2	P25440	801 aa	Known RBP	11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	PPP3CC	P48454	512 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	KIF11	P52732	1056 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	ZNF132	P52740	706 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	GCNT1	Q02742	428 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	RUNX3	Q13761	415 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	ITPRIPL2	Q3MIP1	535 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	SGO2	Q562F6	1265 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	ARSI	Q5FYB1	569 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	SNX30	Q5VWJ9	437 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	ANKRD52	Q8NB46	1076 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	PDZD8	Q8NEN9	1154 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	OVCA2	Q8WZ82	227 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	PNPLA8	Q9NP80	782 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	SIX2	Q9NPC8	291 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	DUS2	Q9NX74	493 aa	Known RBP	11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	CFAP97	Q9P2B7	532 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	DACH1	Q9UI36	760 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	SCML2	Q9UQR0	700 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	NFE2L3	Q9Y4A8	694 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	USP3	Q9Y6I4	520 aa		11.43	□□□□□ -0.58
LDHA-215	ENST00000537296	KCNJ18	B7U540	433 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	PIK3R2	O00459	728 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	TLR5	O60602	858 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	VDR	P11473	427 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	TCF3	P15923	654 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	PON1	P27169	355 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	YWHAE	P62258	255 aa	Known RBP	11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	KCNJ12	Q14500	433 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	PON2	Q15165	354 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	ANGPT1	Q15389	498 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	MAN2A1	Q16706	1144 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	EML3	Q32P44	896 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	PKDCC	Q504Y2	493 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	RAB41	Q5JT25	222 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	HECTD3	Q5T447	861 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	CCDC183	Q5T5S1	534 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	DPY19L2P1	Q6NXN4	242 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	BHLHA9	Q7RTU4	235 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	OSCP1	Q8WVF1	389 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	TUBGCP2	Q9BSJ2	902 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	KCNH6	Q9H252	994 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	FBXO44	Q9H4M3	255 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	COMMD8	Q9NX08	183 aa		11.42	□□□□□ -0.58
LDHA-215	ENST00000537296	KIAA1549L	Q6ZVL6	1849 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	BECN2	A8MW95	431 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	MAN2B1	O00754	1011 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	MBD3	O95983	291 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	PNMA6A	P0CW24	399 aa	Predicted RBP	11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	IRF1	P10914	325 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	CHRNB1	P11230	501 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	KRT5	P13647	590 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	PRKCSH	P14314	528 aa	Predicted RBP	11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	PFKL	P17858	780 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	HOXC13	P31276	330 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	PLA2G5	P39877	138 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	TKTL1	P51854	596 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	PTPN5	P54829	565 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	GAS6	Q14393	721 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	ARHGAP44	Q17R89	818 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	EXOC3L4	Q17RC7	722 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	SMYD5	Q6GMV2	418 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	LCLAT1	Q6UWP7	414 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	GBP6	Q6ZN66	633 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296		Q6ZS52	159 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	CLDN23	Q96B33	292 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	OSBPL6	Q9BZF3	934 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	NDST4	Q9H3R1	872 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	LMAN1L	Q9HAT1	526 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	TLR8	Q9NR97	1041 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	TAB2	Q9NYJ8	693 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	CNTN6	Q9UQ52	1028 aa		11.41	□□□□□ -0.58
LDHA-215	ENST00000537296	ANTXRL	A6NF34	631 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	XPO1	O14980	1071 aa	Known RBP	11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	PAEP	P09466	180 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	RARG	P13631	454 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	GJA4	P35212	333 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	IFNAR2	P48551	515 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	RGS7	P49802	495 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	TUB	P50607	506 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	PDE6C	P51160	858 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	BCAT1	P54687	386 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	BST2	Q10589	180 aa	Known RBP	11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	KCNMA1	Q12791	1236 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	MTAP	Q13126	283 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	PDGFRL	Q15198	375 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	GAB4	Q2WGN9	574 aa		11.4	□□□□□ -0.58
LDHA-215	ENST00000537296	VWA3B	Q502W6	1294 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms