RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SETSIPP0DME0 302 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 RAG1P15918 1043 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 GRM5P41594 1212 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 AMPD2Q01433 879 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 SLC39A12Q504Y0 691 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 PAPD7Q5XG87 772 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 MFSD7Q6UXD7 560 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 ZC3H3Q8IXZ2 948 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 RSAD2Q8WXG1 361 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 STMN2Q93045 179 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 TMEM121Q9BTD3 319 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 UBXN6Q9BZV1 441 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 NKIRAS1Q9NYS0 192 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 KLHL14Q9P2G3 628 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 MTRF1LQ9UGC7 380 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 CALB1P05937 261 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 CKBP12277 381 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 TFE3P19532 575 aaPredicted RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 SCTRP47872 440 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 AARSP49588 968 aaKnown RBP eCLIP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 GSCP56915 257 aaPredicted RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 PPP2R2AP63151 447 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 ZC3H12AQ5D1E8 599 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 NPNTQ6UXI9 565 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 PIGZQ86VD9 579 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 FAM172AQ8WUF8 416 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 RAPGEF5Q92565 580 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 AGAP3Q96P47 875 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 PTPRHQ9HD43 1115 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 PRM3Q9NNZ6 103 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 CYTH4Q9UIA0 394 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 DCDC2CA8MYV0 355 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 SUN1O94901 812 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 CD4P01730 458 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 TKTL1P51854 596 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 AP3M2P53677 418 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 LPIN1Q14693 890 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 LRRC14Q15048 493 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 TIGD5Q53EQ6 642 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 OVOS1Q6IE37 1185 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 DARS2Q6PI48 645 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 FAM183BPQ6ZVS7 135 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 C3orf58Q8NDZ4 430 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 USP33Q8TEY7 942 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 SYT15Q9BQS2 421 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 OSBPL8Q9BZF1 889 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 STMN4Q9H169 189 aaPredicted RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 R3HDM2Q9Y2K5 976 aaKnown RBP8.58□□□□□ -1.04
ABCA4-207ENST00000536513 COQ4Q9Y3A0 265 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 F5P12259 2224 aa8.58□□□□□ -1.04
ABCA4-207ENST00000536513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 M0QYT0 321 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 MDM4O15151 490 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 BEST1O76090 585 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 FSBPO95073 299 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 CCL5P13501 91 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 CYP2F1P24903 491 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 STX2P32856 288 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 GJA9P57773 515 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 TRIM60Q495X7 471 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 NUGGCQ68CJ6 796 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 ZNF449Q6P9G9 518 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 AGMOQ6ZNB7 445 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 FAM47EQ6ZV65 393 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 RHOT1Q8IXI2 618 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SCAMP5Q8TAC9 235 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 ABTB1Q969K4 478 aaPredicted RBP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SNX27Q96L92 541 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 C9orf72Q96LT7 481 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 BATF3Q9NR55 127 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 PRKAG2Q9UGJ0 569 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 ITGA11Q9UKX5 1188 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SNX10Q9Y5X0 201 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SCINQ9Y6U3 715 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 GRIN2DO15399 1336 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SNUPNO95149 360 aaKnown RBP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 RARAP10276 462 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SULT1E1P49888 294 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 ERFP50548 548 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 PITX1P78337 314 aaPredicted RBP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 OGDHQ02218 1023 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 DBN1Q16643 649 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SV2CQ496J9 727 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 DPY19L2P1Q6NXN4 242 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 CEP128Q6ZU80 1094 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SPATA2LQ8IUW3 424 aaPredicted RBP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SDR16C5Q8N3Y7 309 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 GDAP1Q8TB36 358 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 DEPDC1BQ8WUY9 529 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 CHMP6Q96FZ7 201 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 TNIP3Q96KP6 325 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 SLITRK6Q9H5Y7 841 aa8.57□□□□□ -1.04
ABCA4-207ENST00000536513 RYDENQ9NUL5 291 aaKnown RBP8.57□□□□□ -1.04
ABCA4-207ENST00000536513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms