RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TBXAS1P24557 533 aaPredicted RBP15.04■□□□□ -0
UBE3B-206ENST00000536398 TUBP50607 506 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 PDE4CQ08493 712 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 GAB4Q2WGN9 574 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 SGO2Q562F6 1265 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 TMEM196Q5HYL7 178 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 PKN3Q6P5Z2 889 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 C1orf228Q6PIY5 440 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 TMEM270Q6UE05 265 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 ADGRG2Q8IZP9 1017 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 EZH1Q92800 747 aaPredicted RBP15.04■□□□□ -0
UBE3B-206ENST00000536398 CRACR2AQ9BSW2 395 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 DNAI2Q9GZS0 605 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 FAM124BQ9H5Z6 455 aaPredicted RBP15.04■□□□□ -0
UBE3B-206ENST00000536398 PNPLA8Q9NP80 782 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 PRMT8Q9NR22 394 aaPredicted RBP15.04■□□□□ -0
UBE3B-206ENST00000536398 TLR8Q9NR97 1041 aaKnown RBP15.04■□□□□ -0
UBE3B-206ENST00000536398 TSPAN16Q9UKR8 245 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 FBXO4Q9UKT5 387 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 MYH10P35580 1976 aa15.04■□□□□ -0
UBE3B-206ENST00000536398 VDRP11473 427 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 TDGF1P13385 188 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 RARGP13631 454 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 YWHAEP62258 255 aaKnown RBP15.03■□□□□ -0
UBE3B-206ENST00000536398 DMWDQ09019 674 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 CETN1Q12798 172 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 GRSF1Q12849 480 aaKnown RBP eCLIP15.03■□□□□ -0
UBE3B-206ENST00000536398 LRRC32Q14392 662 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 HSP90AA4PQ58FG1 418 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 RAB41Q5JT25 222 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 DGKKQ5KSL6 1271 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 GJB7Q6PEY0 223 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 RHBDF2Q6PJF5 856 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 BBS7Q8IWZ6 715 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 P2RY13Q9BPV8 354 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 KLF16Q9BXK1 252 aaPredicted RBP15.03■□□□□ -0
UBE3B-206ENST00000536398 UBXN6Q9BZV1 441 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 NACA2Q9H009 215 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 CYLDQ9NQC7 956 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.03■□□□□ -0
UBE3B-206ENST00000536398 NAGPAQ9UK23 515 aa15.03■□□□□ -0
UBE3B-206ENST00000536398 HELZP42694 1942 aaKnown RBP15.02■□□□□ -0
UBE3B-206ENST00000536398 PATJQ8NI35 1801 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 E2F8A0AVK6 867 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 PRR23AA6NEV1 266 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 O00370 1275 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 GREM1O60565 184 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 GABBR2O75899 941 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 CYP17A1P05093 508 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 SLC9A1P19634 815 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 BRD2P25440 801 aaKnown RBP15.02■□□□□ -0
UBE3B-206ENST00000536398 OPRD1P41143 372 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 SLC6A11P48066 632 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 MESP2Q0VG99 397 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 DHCR24Q15392 516 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 ZNF528Q3MIS6 628 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 MAMSTRQ6ZN01 415 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 SPEM1Q8N4L4 309 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 RBBP8NLQ8NC74 664 aaPredicted RBP15.02■□□□□ -0
UBE3B-206ENST00000536398 NKD2Q969F2 451 aaPredicted RBP15.02■□□□□ -0
UBE3B-206ENST00000536398 GBP4Q96PP9 640 aa15.02■□□□□ -0
UBE3B-206ENST00000536398 UBE2TQ9NPD8 197 aaPredicted RBP15.02■□□□□ -0
UBE3B-206ENST00000536398 ZFHX2Q9C0A1 2572 aaPredicted RBP15.02□□□□□ -0.01
UBE3B-206ENST00000536398 PIEZO1Q92508 2521 aa15.02□□□□□ -0.01
UBE3B-206ENST00000536398 PIK3R2O00459 728 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 XPO1O14980 1071 aaKnown RBP15.01□□□□□ -0.01
UBE3B-206ENST00000536398 NFATC1O95644 943 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 PAEPP09466 180 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 ATP5C1P36542 298 aaKnown RBP15.01□□□□□ -0.01
UBE3B-206ENST00000536398 CXCL12P48061 93 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 TKTL1P51854 596 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 ZNF132P52740 706 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 AMPD2Q01433 879 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 GCNT1Q02742 428 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 NR1H3Q13133 447 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 TPD52L1Q16890 204 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-206ENST00000536398 PKDCCQ504Y2 493 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 C10orf120Q5SQS8 335 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 LCLAT1Q6UWP7 414 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 BHLHA9Q7RTU4 235 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 C12orf40Q86WS4 652 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 DDX42Q86XP3 938 aaKnown RBP eCLIP15.01□□□□□ -0.01
UBE3B-206ENST00000536398 SFTPA1Q8IWL2 248 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 NELL1Q92832 810 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 CD101Q93033 1021 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 ULBP1Q9BZM6 244 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 THAP9Q9H5L6 903 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 KIAA1257Q9ULG3 409 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 SH3BP1Q9Y3L3 701 aa15.01□□□□□ -0.01
UBE3B-206ENST00000536398 K7ESF4 209 aa15□□□□□ -0.01
UBE3B-206ENST00000536398 SLC9A3R1O14745 358 aaPredicted RBP15□□□□□ -0.01
UBE3B-206ENST00000536398 RNF40O75150 1001 aa15□□□□□ -0.01
UBE3B-206ENST00000536398 MTIF2P46199 727 aaKnown RBP15□□□□□ -0.01
UBE3B-206ENST00000536398 RGS7P49802 495 aa15□□□□□ -0.01
UBE3B-206ENST00000536398 CCR3P51677 355 aa15□□□□□ -0.01
UBE3B-206ENST00000536398 BCAT1P54687 386 aa15□□□□□ -0.01
UBE3B-206ENST00000536398 BST2Q10589 180 aaKnown RBP15□□□□□ -0.01
UBE3B-206ENST00000536398 LY6G5CQ5SRR4 150 aa15□□□□□ -0.01
UBE3B-206ENST00000536398 PM20D1Q6GTS8 502 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms