RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 GPR158Q5T848 1215 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 TANGO2Q6ICL3 276 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 ELMOD1Q8N336 334 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
CHFR-210ENST00000535527 ZSCAN18Q8TBC5 510 aaPredicted RBP13.81□□□□□ -0.2
CHFR-210ENST00000535527 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
CHFR-210ENST00000535527 CYP2S1Q96SQ9 504 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 PCDHB18PQ96TA0 734 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 ULBP1Q9BZM6 244 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 RNF38Q9H0F5 515 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 PNPLA8Q9NP80 782 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 NUDT5Q9UKK9 219 aa13.81□□□□□ -0.2
CHFR-210ENST00000535527 A0A1W2PQH9 124 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 MDM4O15151 490 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 YWHAQP27348 245 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 TKTL1P51854 596 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 PTPN20Q4JDL3 420 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 CYP4A22Q5TCH4 519 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 CWF19L1Q69YN2 538 aaKnown RBP13.8□□□□□ -0.2
CHFR-210ENST00000535527 VITQ6UXI7 678 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 DNAAF5Q86Y56 855 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 MAB21L3Q8N8X9 362 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 DTWD2Q8NBA8 298 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 FLCNQ8NFG4 579 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 USP13Q92995 863 aaPredicted RBP13.8□□□□□ -0.2
CHFR-210ENST00000535527 FBXO32Q969P5 355 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
CHFR-210ENST00000535527 CPXM1Q96SM3 734 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 KCNK12Q9HB15 430 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
CHFR-210ENST00000535527 PCDHGC3Q9UN70 934 aa13.8□□□□□ -0.2
CHFR-210ENST00000535527 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
CHFR-210ENST00000535527 TBX18O95935 607 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 ERBB2P04626 1255 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 TPM2P07951 284 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 SETSIPP0DME0 302 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 CDC25CP30307 473 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 PDCLQ13371 301 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 GRM2Q14416 872 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 SARM1Q6SZW1 724 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 CCDC186Q7Z3E2 898 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 IRF2BP2Q7Z5L9 587 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 ARL14EPQ8N8R7 260 aaPredicted RBP13.79□□□□□ -0.2
CHFR-210ENST00000535527 LEMD2Q8NC56 503 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 KCTD13Q8WZ19 329 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 CEP295NLQ96MC4 621 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 SLC4A5Q9BY07 1137 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 TASP1Q9H6P5 420 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 TRPC7Q9HCX4 862 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHFR-210ENST00000535527 KIAA1257Q9ULG3 409 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
CHFR-210ENST00000535527 SHISA7A6NL88 538 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 YJEFN3A6XGL0 299 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 E5RJQ4 531 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 E7ENQ6 273 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 ZNF197O14709 1029 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 PAPSS1O43252 624 aaPredicted RBP13.78□□□□□ -0.2
CHFR-210ENST00000535527 COCHO43405 550 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 PI15O43692 258 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 RTN3O95197 1032 aaPredicted RBP13.78□□□□□ -0.2
CHFR-210ENST00000535527 FYNP06241 537 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 LCP1P13796 627 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 CDH5P33151 784 aaPredicted RBP13.78□□□□□ -0.2
CHFR-210ENST00000535527 DAOAP59103 153 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 NOMO3P69849 1222 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 PITX1P78337 314 aaPredicted RBP13.78□□□□□ -0.2
CHFR-210ENST00000535527 ARID5AQ03989 594 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 USP4Q13107 963 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 TDGQ13569 410 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 SNX30Q5VWJ9 437 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 HGSNATQ68CP4 663 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 PM20D1Q6GTS8 502 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 MON1AQ86VX9 555 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 ARID3BQ8IVW6 561 aaPredicted RBP13.78□□□□□ -0.2
CHFR-210ENST00000535527 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 CMTM8Q8IZV2 173 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 ACSF2Q96CM8 615 aaPredicted RBP13.78□□□□□ -0.2
CHFR-210ENST00000535527 P2RY11Q96G91 374 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 UBXN6Q9BZV1 441 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 TRPV4Q9HBA0 871 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 GDE1Q9NZC3 331 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
CHFR-210ENST00000535527 ARNTLO00327 626 aa13.77□□□□□ -0.21
CHFR-210ENST00000535527 GREM1O60565 184 aa13.77□□□□□ -0.21
CHFR-210ENST00000535527 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
CHFR-210ENST00000535527 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
CHFR-210ENST00000535527 PTK2Q05397 1052 aa13.77□□□□□ -0.21
CHFR-210ENST00000535527 PTP4A2Q12974 167 aa13.77□□□□□ -0.21
CHFR-210ENST00000535527 TAF5Q15542 800 aa13.77□□□□□ -0.21
CHFR-210ENST00000535527 ZNF77Q15935 545 aa13.77□□□□□ -0.21
CHFR-210ENST00000535527 TAF12Q16514 161 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms