RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SPECC1L-ADORA2AF8WAN1 911 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CKMP06732 381 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 ZDHHC11BP0C7U3 371 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CHRNB1P11230 501 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CCDC130P13994 396 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 UCHL3P15374 230 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CTHP32929 405 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 TUBP50607 506 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 KPNA1P52294 538 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 SLC5A3P53794 718 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 RAD23BP54727 409 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 AMPD2Q01433 879 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 RUNX3Q13761 415 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 MTF1Q14872 753 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 DRAP1Q14919 205 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 NR1I3Q14994 352 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 ZNF528Q3MIS6 628 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CC2D1AQ6P1N0 951 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 OSCP1Q8WVF1 389 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 JAKMIP2Q96AA8 810 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CYFIP2Q96F07 1278 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 ZFYVE19Q96K21 471 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 TRIM5Q9C035 493 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 XPO4Q9C0E2 1151 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 CHRDQ9H2X0 955 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 FBXO44Q9H4M3 255 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 NLRC4Q9NPP4 1024 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 GTSE1Q9NYZ3 720 aa13.66□□□□□ -0.22
TRAPPC4-212ENST00000533058 GREB1Q4ZG55 1949 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 A0A1W2PQC6 194 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 BEST1O76090 585 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 ACO1P21399 889 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 MRE11P49959 708 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 DGKKQ5KSL6 1271 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 ARHGAP17Q68EM7 881 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 CLEC20AQ6ZU45 233 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 MAML2Q8IZL2 1156 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 SYNPOQ8N3V7 929 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 UBR7Q8N806 425 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 SLC4A11Q8NBS3 891 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 SCAMP5Q8TAC9 235 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 SH3RF2Q8TEC5 729 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 UBXN6Q9BZV1 441 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 RNF38Q9H0F5 515 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 GANQ9H2C0 597 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 SEMA4AQ9H3S1 761 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 HPS4Q9NQG7 708 aa13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 AJAP1Q9UKB5 411 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC4-212ENST00000533058 HHLA1C9JL84 531 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 FOXN3O00409 490 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 TRDMT1O14717 391 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 LAMTOR5O43504 91 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 PAEPP09466 180 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 VDRP11473 427 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 MAP3K7CLP57077 242 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 TNK2Q07912 1038 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 LRRC32Q14392 662 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 TXNDC11Q6PKC3 985 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 ALYREFQ86V81 257 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZNF276Q8N554 614 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 SHC3Q92529 594 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 NELL1Q92832 810 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 ATP2A3Q93084 1043 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 DUSP16Q9BY84 665 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 STK33Q9BYT3 514 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 LMAN1LQ9HAT1 526 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 SPATA6Q9NWH7 488 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 NDRG2Q9UN36 371 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 DAAM1Q9Y4D1 1078 aa13.64□□□□□ -0.23
TRAPPC4-212ENST00000533058 OBSL1O75147 1896 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 OTOL1A6NHN0 477 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 RNF225M0QZC1 329 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 LEFTY2O00292 366 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 EPHB6O15197 1021 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 CYP26A1O43174 497 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 THAP12O43422 761 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 CALCAP01258 141 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 SP9P0CG40 484 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 PNMA6AP0CW24 399 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 BRD2P25440 801 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 SOX9P48436 509 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZXDBP98169 803 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 PTK2Q05397 1052 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 CCINQ13939 588 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 GOLGA7BQ2TAP0 167 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 EML3Q32P44 896 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 HECTD3Q5T447 861 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 PPP1R26Q5T8A7 1209 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 DPY19L2P1Q6NXN4 242 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms