RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 DDNO94850 711 aaPredicted RBP17.54■□□□□ 0.4
VPS26B-206ENST00000531741 IL1BP01584 269 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 VTNP04004 478 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 TROVE2P10155 538 aaKnown RBP eCLIP17.54■□□□□ 0.4
VPS26B-206ENST00000531741 DESP17661 470 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 SLC6A3Q01959 620 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 PTK7Q13308 1070 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 GOLGA7BQ2TAP0 167 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 DCAF4L1Q3SXM0 396 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 ZNF410Q86VK4 478 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 SESTD1Q86VW0 696 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 PQLC3Q8N755 202 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 AGAP11Q8TF27 550 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 APBB2Q92870 758 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 APOPT1Q96IL0 206 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 C16orf70Q9BSU1 422 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 ZNF180Q9UJW8 692 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 TRIM33Q9UPN9 1127 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 IKBKGQ9Y6K9 419 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 HNRNPCL1O60812 293 aaKnown RBP17.54■□□□□ 0.4
VPS26B-206ENST00000531741 C1QAP02745 245 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 INHBAP08476 426 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 GSTA2P09210 222 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 ETV4P43268 484 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 RASSF2P50749 326 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 E2F5Q15329 346 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 ZNF792Q3KQV3 632 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 KBTBD12Q3ZCT8 623 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 SLC35F5Q8WV83 523 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.4
VPS26B-206ENST00000531741 LRRC39Q96DD0 335 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 KIF12Q96FN5 646 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 ADAM33Q9BZ11 813 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 MANSC1Q9H8J5 431 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 PCDH18Q9HCL0 1135 aa17.54■□□□□ 0.4
VPS26B-206ENST00000531741 TRDMT1O14717 391 aaKnown RBP17.53■□□□□ 0.4
VPS26B-206ENST00000531741 SDC4P31431 198 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 NRLP54845 237 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 BCAR1P56945 870 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 YWHAZP63104 245 aaKnown RBP17.53■□□□□ 0.4
VPS26B-206ENST00000531741 ATP11AP98196 1134 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 RAB6CQ53S08 254 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 PMF1Q6P1K2 205 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 C1orf228Q6PIY5 440 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 DPH6Q7L8W6 267 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 TAB3Q8N5C8 712 aaPredicted RBP17.53■□□□□ 0.4
VPS26B-206ENST00000531741 MCUQ8NE86 351 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 NLRP7Q8WX94 980 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 OPTNQ96CV9 577 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 KLC2Q9H0B6 622 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 RAB6CQ9H0N0 254 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 SAR1AQ9NR31 198 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 RAB6BQ9NRW1 208 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 SLC17A7Q9P2U7 560 aa17.53■□□□□ 0.4
VPS26B-206ENST00000531741 LPXNO60711 386 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 TGDSO95455 350 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 SCNN1AP37088 669 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 CDO1Q16878 200 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 PPP1R26Q5T8A7 1209 aaPredicted RBP17.52■□□□□ 0.4
VPS26B-206ENST00000531741 ARCQ7LC44 396 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 NLRP9Q7RTR0 991 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 APBB1IPQ7Z5R6 666 aaPredicted RBP17.52■□□□□ 0.4
VPS26B-206ENST00000531741 SLC26A11Q86WA9 606 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 TTC30AQ86WT1 665 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 C12orf29Q8N999 325 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 PCDH19Q8TAB3 1148 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 FAM172AQ8WUF8 416 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 UTP4Q969X6 686 aaKnown RBP17.52■□□□□ 0.4
VPS26B-206ENST00000531741 TBC1D31Q96DN5 1066 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 CDCA5Q96FF9 252 aa17.52■□□□□ 0.4
VPS26B-206ENST00000531741 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.52■□□□□ 0.4
VPS26B-206ENST00000531741 KCNN4O15554 427 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 ZBED1O96006 694 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 T-ENOLP0DO92 83 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 PRKCHP24723 683 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 PTPN9P43378 593 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 YWHAGP61981 247 aaKnown RBP eCLIP17.52■□□□□ 0.39
VPS26B-206ENST00000531741 ARHGAP17Q68EM7 881 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 UNC93AQ86WB7 457 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 LRRC52Q8N7C0 313 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 THOC1Q96FV9 657 aaKnown RBP17.52■□□□□ 0.39
VPS26B-206ENST00000531741 PPP1R16BQ96T49 567 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 SNRNP25Q9BV90 132 aaKnown RBP17.52■□□□□ 0.39
VPS26B-206ENST00000531741 NOP53Q9NZM5 478 aaKnown RBP17.52■□□□□ 0.39
VPS26B-206ENST00000531741 GTF2IRD1Q9UHL9 959 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 RPL26L1Q9UNX3 145 aaKnown RBP17.52■□□□□ 0.39
VPS26B-206ENST00000531741 STK38LQ9Y2H1 464 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 TTLL3Q9Y4R7 772 aa17.52■□□□□ 0.39
VPS26B-206ENST00000531741 KLF11O14901 512 aa17.51■□□□□ 0.39
VPS26B-206ENST00000531741 GRAP2O75791 330 aa17.51■□□□□ 0.39
VPS26B-206ENST00000531741 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
VPS26B-206ENST00000531741 FAAP100Q0VG06 881 aa17.51■□□□□ 0.39
VPS26B-206ENST00000531741 GJC2Q5T442 439 aaPredicted RBP17.51■□□□□ 0.39
VPS26B-206ENST00000531741 TTC39BQ5VTQ0 682 aaPredicted RBP17.51■□□□□ 0.39
VPS26B-206ENST00000531741 TLDC1Q6P9B6 456 aa17.51■□□□□ 0.39
VPS26B-206ENST00000531741 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
VPS26B-206ENST00000531741 SLC7A6OSQ96CW6 309 aaPredicted RBP17.51■□□□□ 0.39
VPS26B-206ENST00000531741 SERAC1Q96JX3 654 aa17.51■□□□□ 0.39
VPS26B-206ENST00000531741 C11orf84Q9BUA3 381 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms