RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 YWHAZP63104 245 aaKnown RBP11.41□□□□□ -0.58
SRPRA-205ENST00000531104 LMNB2Q03252 620 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 SNX1Q13596 522 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 DPYSL3Q14195 570 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 SLC25A52Q3SY17 297 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 SPDYCQ5MJ68 293 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 ALS2CLQ60I27 953 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 PM20D1Q6GTS8 502 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 FBXO46Q6PJ61 603 aaPredicted RBP11.41□□□□□ -0.58
SRPRA-205ENST00000531104 RHBDF2Q6PJF5 856 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 GPRIN1Q7Z2K8 1008 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
SRPRA-205ENST00000531104 NPAS4Q8IUM7 802 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 IQCKQ8N0W5 287 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 DEFB106AQ8N104 65 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 DNAJC5GQ8N7S2 189 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 KCTD6Q8NC69 237 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 PIK3R5Q8WYR1 880 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 IRGQQ8WZA9 623 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 SCLYQ96I15 445 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 KCNK16Q96T55 309 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 TMEM175Q9BSA9 504 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 SNRNP25Q9BV90 132 aaKnown RBP11.41□□□□□ -0.58
SRPRA-205ENST00000531104 DPH5Q9H2P9 285 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 LRRC4Q9HBW1 653 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 MARCH5Q9NX47 278 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 CALCOCO1Q9P1Z2 691 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 WHRNQ9P202 907 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 SNX24Q9Y343 169 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 USP3Q9Y6I4 520 aa11.41□□□□□ -0.58
SRPRA-205ENST00000531104 HTTP42858 3142 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 COL4A6Q14031 1691 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 TTC3P53804 2025 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 SCN5AQ14524 2016 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 H3BQF6 201 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 TRAPPC3O43617 180 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 PPFIA2O75334 1257 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ITGAVP06756 1048 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 DESP17661 470 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 FGFR3P22607 806 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 RFC2P35250 354 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 OR1G1P47890 313 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 GJA8P48165 433 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 VCPP55072 806 aaKnown RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ATP11AP98196 1134 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 KRT17Q04695 432 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 YWHAHQ04917 246 aaPredicted RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 HLTFQ14527 1009 aaKnown RBP eCLIP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 DPYSL2Q16555 572 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ODF2Q5BJF6 829 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ERMARDQ5T6L9 678 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 KAZNQ674X7 775 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 HFE2Q6ZVN8 426 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 BEND5Q7L4P6 421 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 PSTKQ8IV42 348 aaKnown RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 SIX6OS1Q8N1H7 587 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ALLCQ8N6M5 410 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 DIS3LQ8TF46 1054 aaKnown RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 NDRG1Q92597 394 aaKnown RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 HSPH1Q92598 858 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 PGAP3Q96FM1 320 aaPredicted RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 GDAP1L1Q96MZ0 367 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 FAM193BQ96PV7 902 aaPredicted RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 RNF157Q96PX1 679 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 COLEC11Q9BWP8 271 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 MRPL9Q9BYD2 267 aaKnown RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ULBP1Q9BZM6 244 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 ACBD3Q9H3P7 528 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 POPDC2Q9HBU9 364 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 PCDH18Q9HCL0 1135 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 NGRNQ9NPE2 291 aaKnown RBP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.4□□□□□ -0.58
SRPRA-205ENST00000531104 DNPEPQ9ULA0 475 aa11.4□□□□□ -0.58
SRPRA-205ENST00000531104 APOC4-APOC2K7ER74 178 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 TNFRSF10BO14763 440 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 TBC1D4O60343 1298 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 CST8O60676 142 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 SYF2O95926 243 aaKnown RBP11.39□□□□□ -0.59
SRPRA-205ENST00000531104 GAS8O95995 478 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 APOC2P02655 101 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 HSPA8P11142 646 aaKnown RBP11.39□□□□□ -0.59
SRPRA-205ENST00000531104 CAPN2P17655 700 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 ITIH2P19823 946 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 BDNFP23560 247 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 L1CAMP32004 1257 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 CYP2C18P33260 490 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 SLC11A1P49279 550 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 GATMP50440 423 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 RABGGTBP53611 331 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 CDH6P55285 790 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 CCL23P55773 120 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 TSPY1Q01534 308 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 RNASELQ05823 741 aaKnown RBP11.39□□□□□ -0.59
SRPRA-205ENST00000531104 BYSLQ13895 437 aaKnown RBP11.39□□□□□ -0.59
SRPRA-205ENST00000531104 PPP1R7Q15435 360 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 UAP1Q16222 522 aaPredicted RBP11.39□□□□□ -0.59
SRPRA-205ENST00000531104 CA9Q16790 459 aa11.39□□□□□ -0.59
SRPRA-205ENST00000531104 CDO1Q16878 200 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms