RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 MMP19Q99542 508 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 APOL6Q9BWW8 343 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 N6AMT1Q9Y5N5 214 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 COL5A2P05997 1499 aaPredicted RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 SDR42E2A6NKP2 422 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 CALCAP01258 141 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 CYP1A2P05177 515 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 HSPA8P11142 646 aaKnown RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 ITGAXP20702 1163 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 ENDOUP21128 410 aaKnown RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 MAPK4P31152 587 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 CENPCQ03188 943 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 NLRP7Q8WX94 980 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 CELF1Q92879 486 aaKnown RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 ALKBH8Q96BT7 664 aaKnown RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 APOPT1Q96IL0 206 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 MAELQ96JY0 434 aaKnown RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 EPS15L1Q9UBC2 864 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 PADI4Q9UM07 663 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 LAMB2P55268 1798 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 ESYT2A0FGR8 921 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 IFNB1P01574 187 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 CD58P19256 250 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 EVA1CP58658 441 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 CREB5Q02930 508 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 EPS8L1Q8TE68 723 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 EYA3Q99504 573 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 SLC2A11Q9BYW1 496 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 RABL2BQ9UNT1 228 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 AFG3L2Q9Y4W6 797 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 RPA1P27694 616 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 FAAP100Q0VG06 881 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 ADGRE1Q14246 886 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 RGS21Q2M5E4 152 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 FRMD7Q6ZUT3 714 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 LARGE2Q8N3Y3 721 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 Q8N9G6 341 aaPredicted RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 E2F7Q96AV8 911 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 SPATA17Q96L03 361 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 SENP7Q9BQF6 1050 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 NRDE2Q9H7Z3 1164 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 GID8Q9NWU2 228 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 SCHIP1Q9P0W5 487 aaPredicted RBP14.66□□□□□ -0.06
PCF11-204ENST00000530660 PRELID1Q9Y255 219 aa14.66□□□□□ -0.06
PCF11-204ENST00000530660 ATRNL1Q5VV63 1379 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 TRIM64CA6NLI5 447 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 PFDN6O15212 129 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 H6PDO95479 791 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 KRT10P13645 584 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 HIBADHP31937 336 aaKnown RBP14.65□□□□□ -0.06
PCF11-204ENST00000530660 GNA12Q03113 381 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 KCNC4Q03721 635 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 FNBP1LQ5T0N5 605 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 PLEKHA7Q6IQ23 1121 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 RWDD4Q6NW29 188 aaKnown RBP14.65□□□□□ -0.06
PCF11-204ENST00000530660 RSPH3Q86UC2 560 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 TICAM1Q8IUC6 712 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 SDR16C5Q8N3Y7 309 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 CCDC33Q8N5R6 958 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 CEP95Q96GE4 821 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 WDR83Q9BRX9 315 aaKnown RBP14.65□□□□□ -0.06
PCF11-204ENST00000530660 ANO3Q9BYT9 981 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 FOXP3Q9BZS1 431 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 RIMS3Q9UJD0 308 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 CARD8Q9Y2G2 431 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 SCINQ9Y6U3 715 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 INHBBP09529 407 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 MYCLP1P12525 358 aaPredicted RBP14.65□□□□□ -0.06
PCF11-204ENST00000530660 GABRB3P28472 473 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 NMT1P30419 496 aaKnown RBP14.65□□□□□ -0.06
PCF11-204ENST00000530660 PTK7Q13308 1070 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 TBCCQ15814 346 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 GPR141Q7Z602 305 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 TXNRD3Q86VQ6 643 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 SLC15A4Q8N697 577 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 PCYOX1LQ8NBM8 494 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 ELMO3Q96BJ8 720 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 C7orf26Q96N11 449 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 PKP2Q99959 881 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 KLHL25Q9H0H3 589 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 IFT122Q9HBG6 1241 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 DKK3Q9UBP4 350 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 GTF3C4Q9UKN8 822 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 ROBO3Q96MS0 1386 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 KDM3AQ9Y4C1 1321 aa14.65□□□□□ -0.06
PCF11-204ENST00000530660 PTPN1P18031 435 aaKnown RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 EPHA3P29320 983 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 DLG4P78352 724 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 TSPY1Q01534 308 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 ZBTB17Q13105 803 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 HIF1AQ16665 826 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 HYIQ5T013 277 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 TRIM72Q6ZMU5 477 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 CRLF3Q8IUI8 442 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 LMO3Q8TAP4 145 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 PTCD2Q8WV60 388 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms