RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 DENND4CQ5VZ89 1909 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 A0A0A6YYK5 440 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 E5RJQ4 531 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 DPYSL4O14531 572 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SLC9A3R1O14745 358 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 HCRTO43612 131 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 RNF8O76064 485 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ABL1P00519 1130 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 USP17L7P0C7H9 530 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 PNMA6AP0CW24 399 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SKILP12757 684 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 MYL4P12829 197 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 FSHRP23945 695 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 GABRR2P28476 465 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SDC4P31431 198 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 NOS2P35228 1153 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ATP5C1P36542 298 aaKnown RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ARHGAP25P42331 645 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 MATKP42679 507 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF135P52742 658 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 DAOAP59103 153 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 TAF10Q12962 218 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ADGRE1Q14246 886 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 PIGHQ14442 188 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 CBX2Q14781 532 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ARL13BQ3SXY8 428 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 LEXMQ3ZCV2 418 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 RARS2Q5T160 578 aaKnown RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 FAM102AQ5T9C2 384 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 NUGGCQ68CJ6 796 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 WDR59Q6PJI9 974 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 TMC5Q6UXY8 1006 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 MMS22LQ6ZRQ5 1243 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SPRED2Q7Z698 418 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 UNC45BQ8IWX7 931 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 MCOLN2Q8IZK6 566 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SMRP1Q8NCR6 262 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ZMIZ2Q8NF64 920 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 FNIP1Q8TF40 1166 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 GIPC2Q8TF65 315 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SLC20A1Q8WUM9 679 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 CPA5Q8WXQ8 436 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF653Q96CK0 615 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SERPINB11Q96P15 392 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SYT11Q9BT88 431 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 DCLK3Q9C098 648 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 ATXN3LQ9H3M9 355 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 SLITRK6Q9H5Y7 841 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 TASP1Q9H6P5 420 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 THG1LQ9NWX6 298 aaKnown RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 OBP2AQ9NY56 170 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 PRKAG3Q9UGI9 489 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 IP6K2Q9UHH9 426 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 DNMT3LQ9UJW3 386 aa8.31□□□□□ -1.08
SSBP3-211ENST00000528787 LSM7Q9UK45 103 aaKnown RBP8.31□□□□□ -1.08
SSBP3-211ENST00000528787 A0A087X0T9 212 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 TYW5A2RUC4 315 aaKnown RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF840PA6NDX5 716 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 SIGLEC16A6NMB1 481 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 BTNL10A8MVZ5 291 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 HHLA1C9JL84 531 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 MYO1FO00160 1098 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 DDX3XO00571 662 aaKnown RBP eCLIP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 DAB1O75553 588 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ZDHHC11BP0C7U3 371 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 FAM228BP0C875 321 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 NCAM1P13591 858 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 HMGA1P17096 107 aaKnown RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 CHRNB2P17787 502 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 HDCP19113 662 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 KCNA5P22460 613 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 SLC1A1P43005 524 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 RGS7P49802 495 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 AMPD2Q01433 879 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 GFPT1Q06210 699 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 IFRD2Q12894 506 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 TCEAL1Q15170 157 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 E2F5Q15329 346 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 PTPN21Q16825 1174 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ASTE1Q2TB18 679 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 PREPLQ4J6C6 727 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ARHGAP29Q52LW3 1261 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ODF2Q5BJF6 829 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 BSPRYQ5W0U4 402 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 CC2D1AQ6P1N0 951 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF662Q6ZS27 426 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 MON1BQ7L1V2 547 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 XYLT1Q86Y38 959 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 SCUBE3Q8IX30 993 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 RNF10Q8N5U6 811 aaKnown RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF557Q8N988 423 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 MAFAQ8NHW3 353 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ATXN2LQ8WWM7 1075 aaKnown RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 RFFLQ8WZ73 363 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 PLD4Q96BZ4 506 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 MCRS1Q96EZ8 462 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms