RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
CAPN1-210ENST00000527699 CHORDC1Q9UHD1 332 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-210ENST00000527699 ZMYM5Q9UJ78 669 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 ARHGAP26Q9UNA1 814 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 GOLGA4Q13439 2230 aaKnown RBP10.54□□□□□ -0.72
CAPN1-210ENST00000527699 A0A087WV48 116 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 TCRBV21S2A2A0A5A6 115 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 ZNF840PA6NDX5 716 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 ENO4A6NNW6 628 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 TRIM24O15164 1050 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 PTPN1P18031 435 aaKnown RBP10.54□□□□□ -0.72
CAPN1-210ENST00000527699 SYT1P21579 422 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 WARSP23381 471 aaKnown RBP10.54□□□□□ -0.72
CAPN1-210ENST00000527699 MAGEA11P43364 429 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 CASP4P49662 377 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 CDH8P55286 799 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 MYL6P60660 151 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 ASIC1P78348 528 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 POU5F1Q01860 360 aaKnown RBP10.54□□□□□ -0.72
CAPN1-210ENST00000527699 NOTCH2Q04721 2471 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 DUOXA2Q1HG44 320 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 WDR72Q3MJ13 1102 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 TDRD10Q5VZ19 366 aaKnown RBP10.54□□□□□ -0.72
CAPN1-210ENST00000527699 PMS2CLQ68D20 193 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 CCDC73Q6ZRK6 1079 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 ADGRG2Q8IZP9 1017 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 MYCBPAPQ8TBZ2 947 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 ZNF516Q92618 1163 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 FUBP3Q96I24 572 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAPN1-210ENST00000527699 SPATA17Q96L03 361 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 KCNK16Q96T55 309 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 COL12A1Q99715 3063 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 B3GNT5Q9BYG0 378 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 BLZF1Q9H2G9 400 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 OLFML3Q9NRN5 406 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 EBF1Q9UH73 591 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 MBD1Q9UIS9 605 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-210ENST00000527699 MMP17Q9ULZ9 603 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 PCDHB9Q9Y5E1 797 aa10.54□□□□□ -0.72
CAPN1-210ENST00000527699 MYO16Q9Y6X6 1858 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 FRMD3A2A2Y4 597 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 A8MXQ7 604 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 TRIM66O15016 1216 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 SLC28A2O43868 658 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 PHACTR2O75167 634 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 APODP05090 189 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 ADH5P11766 374 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 ITPKBP27987 946 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 PTGER3P43115 390 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 TNNC1P63316 161 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 TRPC3Q13507 836 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 STK38Q15208 465 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 CRY1Q16526 586 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 TRIM61Q5EBN2 209 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 COLEC12Q5KU26 742 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 LY6G5CQ5SRR4 150 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 RHBDF2Q6PJF5 856 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 PIP4P1Q86T03 277 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 IL17RCQ8NAC3 791 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 OR2I1PQ8NGU4 316 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 SCAMP5Q8TAC9 235 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 FBXO32Q969P5 355 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 JAKMIP2Q96AA8 810 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 FNBP1Q96RU3 617 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 PNKPQ96T60 521 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 GTPBP2Q9BX10 602 aaKnown RBP10.53□□□□□ -0.72
CAPN1-210ENST00000527699 SMYD3Q9H7B4 428 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 CCSER2Q9H7U1 834 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 TMEM74BQ9NUR3 256 aa10.53□□□□□ -0.72
CAPN1-210ENST00000527699 PI4KAP42356 2102 aa10.52□□□□□ -0.72
CAPN1-210ENST00000527699 KIAA1549LQ6ZVL6 1849 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 TGFB1I1O43294 461 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 COCHO43405 550 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 ALDH1A2O94788 518 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 KAT7O95251 611 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 CFIP05156 583 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 PGFP49763 221 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 SEMA3BQ13214 749 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 CUL4AQ13619 759 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 ALCAMQ13740 583 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 SLC39A14Q15043 492 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 SNRNP35Q16560 246 aaKnown RBP10.52□□□□□ -0.73
CAPN1-210ENST00000527699 ANO4Q32M45 955 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 VSTM1Q6UX27 236 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 LRRC69Q6ZNQ3 347 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 DPH6Q7L8W6 267 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 RASSF3Q86WH2 238 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 WDR49Q8IV35 697 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 GRAMD1CQ8IYS0 662 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 SPRYD3Q8NCJ5 442 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 PLEKHO2Q8TD55 490 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 ADAMTS14Q8WXS8 1223 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 BHMTQ93088 406 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 CNOT6LQ96LI5 555 aaKnown RBP10.52□□□□□ -0.73
CAPN1-210ENST00000527699 CGRRF1Q99675 332 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 TRIM9Q9C026 710 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 SDCBP2Q9H190 292 aa10.52□□□□□ -0.73
CAPN1-210ENST00000527699 SLC6A17Q9H1V8 727 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms