RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 POPDC2Q9HBU9 364 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 WDR91A4D1P6 747 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 COPEO14579 308 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 GNRH1P01148 92 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 LTFP02788 710 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 USP17L7P0C7H9 530 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 CHRNB2P17787 502 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 CYP2F1P24903 491 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 PMLP29590 882 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 SPARCL1Q14515 664 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 ATP13A4Q4VNC1 1196 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 TMEM63BQ5T3F8 832 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 C17orf99Q6UX52 265 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 SH2D3CQ8N5H7 860 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 FAXDC2Q96IV6 333 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 PTPN18Q99952 460 aa9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 TRMT13Q9NUP7 481 aaKnown RBP9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 LSM7Q9UK45 103 aaKnown RBP9.18□□□□□ -0.94
PPFIA1-206ENST00000526262 LAMB1P07942 1786 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 TMEM191CA6NGB0 347 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 NOS2P35228 1153 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 LONRF1Q17RB8 773 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CCDC38Q502W7 563 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 C3orf62Q6ZUJ4 267 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 SPATS2Q86XZ4 545 aaKnown RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CCDC197Q8NCU1 140 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 VPS39Q96JC1 886 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 FRMD8Q9BZ67 464 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 MAGEB5Q9BZ81 275 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 GABRQQ9UN88 632 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CHMP2BQ9UQN3 213 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 RARGP13631 454 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 SELPP16109 830 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CYP3A5P20815 502 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 KDELR1P24390 212 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 BRCC3P46736 316 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 EFEMP1Q12805 493 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CCDC6Q16204 474 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 FAXCQ5TGI0 409 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 ADAM32Q8TC27 787 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 NUDCD1Q96RS6 583 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CPXM1Q96SM3 734 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 FAM124BQ9H5Z6 455 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 PDLIM7Q9NR12 457 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CHST7Q9NS84 486 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 TUBGCP6Q96RT7 1819 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 DPYSL4O14531 572 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 AGTP01019 485 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 LILRA4P59901 499 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 PTK7Q13308 1070 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 DAB2IPQ5VWQ8 1189 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 NUGGCQ68CJ6 796 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CCDC33Q8N5R6 958 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.17□□□□□ -0.942e-7■■■■■ 62.8
PPFIA1-206ENST00000526262 RPRD1AQ96P16 312 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 TTC1Q99614 292 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 PCDHGC3Q9UN70 934 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 COG5Q9UP83 839 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 SCN9AQ15858 1988 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 IGKV6-21A0A0C4DH24 114 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 AP3B1O00203 1094 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CCR1P32246 355 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 RECQLP46063 649 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 RNF219Q5W0B1 726 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 CRELD2Q6UXH1 353 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 MON1BQ7L1V2 547 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 KDELC2Q7Z4H8 507 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 SLC4A11Q8NBS3 891 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 TFAP2BQ92481 460 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 RAPGEF5Q92565 580 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 STRA6Q9BX79 667 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 ROPN1BQ9BZX4 212 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 ROPN1Q9HAT0 212 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 ZFATQ9P243 1243 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
PPFIA1-206ENST00000526262 PSMD3O43242 534 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 CYP1A1P04798 512 aaPredicted RBP9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 DNAJB2P25686 324 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 GJA9P57773 515 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 CST9Q5W186 159 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 LRRC57Q8N9N7 239 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 HIPK3Q9H422 1215 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 PCDH9Q9HC56 1237 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 MLXIPLQ9NP71 852 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 TRPM5Q9NZQ8 1165 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 SENP1Q9P0U3 644 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 CPSF2Q9P2I0 782 aaKnown RBP9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 PTCH2Q9Y6C5 1203 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 KIAA1551Q9HCM1 1747 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 CLDN5O00501 218 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 AMHP03971 560 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 TGM2P21980 687 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 SLC11A2P49281 568 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 IRX4P78413 519 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 MORF4L2Q15014 288 aa9.16□□□□□ -0.94
PPFIA1-206ENST00000526262 SMAD1Q15797 465 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms