RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 ELK3P41970 407 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 GTF2A2P52657 109 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 SLC1A5Q15758 541 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 RAB6CQ53S08 254 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 ARHGAP17Q68EM7 881 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 SLC9A4Q6AI14 798 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 FITM2Q8N6M3 262 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 ZNF670Q9BS34 389 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 RAB6CQ9H0N0 254 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 ABHD16BQ9H3Z7 469 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 FAM49BQ9NUQ9 324 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 CHMP2BQ9UQN3 213 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 IQANK1A0A1B0GTG1 560 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 BTBD19C9JJ37 291 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 EDF1O60869 148 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 NQO1P15559 274 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 IL4RP24394 825 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 SKIV2L2P42285 1042 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 GTF2A1P52655 376 aaPredicted RBP17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 SETDB1Q15047 1291 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 LVRNQ6Q4G3 990 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 RMDN2Q96LZ7 410 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 ZMAT2Q96NC0 199 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 KLC2Q9H0B6 622 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 RAB6BQ9NRW1 208 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 SETD4Q9NVD3 440 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 TEX264Q9Y6I9 313 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 USH1CQ9Y6N9 552 aa17.19■□□□□ 0.34
CCDC90B-203ENST00000525503 PLXNB2O15031 1838 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 PAPSS1O43252 624 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 TOMM70O94826 608 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 ZBED1O96006 694 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 ZFXP17010 805 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 ALDH3A1P30838 453 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 SCNN1AP37088 669 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 PTPN9P43378 593 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 ZNF200P98182 395 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 GRB14Q14449 540 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 CCL15Q16663 113 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 ANKRD23Q86SG2 305 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 TBC1D1Q86TI0 1168 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 ECHDC2Q86YB7 292 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 CDKL3Q8IVW4 592 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 SCUBE3Q8IX30 993 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 PQLC3Q8N755 202 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 OR6B3Q8NGW1 331 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 MZB1Q8WU39 189 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 TINF2Q9BSI4 451 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 SNRNP25Q9BV90 132 aaKnown RBP17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 CYLDQ9NQC7 956 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 GPATCH2LQ9NWQ4 482 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 CNTN3Q9P232 1028 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 TUBGCP4Q9UGJ1 667 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 GRID1Q9ULK0 1009 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 HEY1Q9Y5J3 304 aa17.18■□□□□ 0.34
CCDC90B-203ENST00000525503 ECM2O94769 699 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 MT-ND3P03897 115 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 RIPK1Q13546 671 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 C9orf57Q5W0N0 161 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 ARCQ7LC44 396 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 PCDH19Q8TAB3 1148 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 ZNF75CPQ92670 426 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 KLHL29Q96CT2 875 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 MS4A4AQ96JQ5 239 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 TRIM6Q9C030 488 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 FAM49AQ9H0Q0 323 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 PNPLA8Q9NP80 782 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 UBQLN1Q9UMX0 589 aaKnown RBP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 GINS2Q9Y248 185 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 UTRNP46939 3433 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 NRCAMQ92823 1304 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 A8MXQ7 604 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 KBTBD13C9JR72 458 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 PPEF2O14830 753 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 GPR32O75388 356 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 CAPN15O75808 1086 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 DCTN3O75935 186 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 ATP5HO75947 161 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 ATP6V1G2O95670 118 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 CD4P01730 458 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 INHBAP08476 426 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 ALADP13716 330 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 AXLP30530 894 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 SLC8A1P32418 973 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 MAGEA6P43360 314 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 NRLP54845 237 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 YWHAGP61981 247 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 MGAT5Q09328 741 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 BST2Q10589 180 aaKnown RBP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 ALKAL1Q6UXT8 129 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 IGDCC3Q8IVU1 814 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 BANPQ8N9N5 519 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 SLC44A1Q8WWI5 657 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 C18orf25Q96B23 403 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 TSPAN18Q96SJ8 248 aa17.17■□□□□ 0.34
CCDC90B-203ENST00000525503 EIF2AQ9BY44 585 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms