RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 HSPA9P38646 679 aaKnown RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 ATN1P54259 1190 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 PLTPP55058 493 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 VCPP55072 806 aaKnown RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 EIF3BP55884 814 aaKnown RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 FAM193AP78312 1265 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 MRPS25P82663 173 aaKnown RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 DEUP1Q05D60 604 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 TAZQ16635 292 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 SMTNL2Q2TAL5 461 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 PAN2Q504Q3 1202 aaKnown RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 DCAF6Q58WW2 860 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 EFHC2Q5JST6 749 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 VSTM1Q6UX27 236 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 BEND5Q7L4P6 421 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 DEFB106AQ8N104 65 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 C3orf58Q8NDZ4 430 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 C2orf15Q8WU43 125 aaKnown RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 LINC01599Q8WXQ3 324 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 RAPGEF5Q92565 580 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 CENPIQ92674 756 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 P3H4Q92791 437 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 NKD2Q969F2 451 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 CFAP57Q96MR6 1250 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 TRIM51Q9BSJ1 452 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 TRIM31Q9BZY9 425 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 FBXO44Q9H4M3 255 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 C11orf49Q9H6J7 331 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 KLHL11Q9NVR0 708 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 COMMD8Q9NX08 183 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 STK39Q9UEW8 545 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 ANAPC5Q9UJX4 755 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 ADAM28Q9UKQ2 775 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 PRG3Q9Y2Y8 225 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 SNX24Q9Y343 169 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 PCDHB5Q9Y5E4 795 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 ABHD14A-ACY1A0A1B0GW23 586 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 TBKBP1A7MCY6 615 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 SGK1O00141 431 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 LTFP02788 710 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 AMHP03971 560 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 CLTBP09497 229 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 KRT10P13645 584 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 BDNFP23560 247 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 CYP2C18P33260 490 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 GRIK1P39086 918 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 NR2C2P49116 596 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.74
VPS13B-212ENST00000524330 CDR1P51861 262 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 DAOAP59103 153 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 TLE2Q04725 743 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 C15orf59Q2T9L4 293 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-212ENST00000524330 CTXN3Q4LDR2 81 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 ATP13A4Q4VNC1 1196 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 RAB41Q5JT25 222 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 KCNT1Q5JUK3 1230 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 DAB2IPQ5VWQ8 1189 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 TTC27Q6P3X3 843 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 ANKS3Q6ZW76 656 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 CDKL3Q8IVW4 592 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-212ENST00000524330 GSPT2Q8IYD1 628 aaKnown RBP10.4□□□□□ -0.74
VPS13B-212ENST00000524330 HASPINQ8TF76 798 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 ARMC5Q96C12 935 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF333Q96JL9 665 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 RNF157Q96PX1 679 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 SLC2A13Q96QE2 648 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 SMOQ99835 787 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 OSBPL7Q9BZF2 842 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 PPP1R12CQ9BZL4 782 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 ULBP1Q9BZM6 244 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 ZCWPW1Q9H0M4 648 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 PLEKHA4Q9H4M7 779 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 PCDH9Q9HC56 1237 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 CHST7Q9NS84 486 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 FAM53CQ9NYF3 392 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 NR2E1Q9Y466 385 aa10.4□□□□□ -0.74
VPS13B-212ENST00000524330 TCRBV7S2A1N4TA0A589 114 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ZSCAN5CA6NGD5 496 aaPredicted RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 H7C0C1 242 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 I3L4J1 428 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 M0QYT0 321 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 NRP1O14786 923 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 HCRTO43612 131 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 STK10O94804 968 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 DDHD2O94830 711 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ENDOD1O94919 500 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 RTN3O95197 1032 aaPredicted RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 MYBL2P10244 700 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 IL1R2P27930 398 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 MAGEA11P43364 429 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ATP5OP48047 213 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 KCNJ1P48048 391 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 GJA8P48165 433 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ALDH7A1P49419 539 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 CCL23P55773 120 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 BCAR1P56945 870 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 EIF3EP60228 445 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms