RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZSWIM1Q9BR11 485 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 LRFN3Q9BTN0 628 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 SMG9Q9H0W8 520 aaKnown RBP13.21□□□□□ -0.29
VEGFA-225ENST00000523950 GANQ9H2C0 597 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 MFSD1Q9H3U5 465 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-225ENST00000523950 PCDHGC3Q9UN70 934 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 KRBA1A5PL33 1030 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 FAM86C2PA6NEL3 165 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 F8VZ95 297 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 CYP26A1O43174 497 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 COCHO43405 550 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 FBXO21O94952 628 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 MBL2P11226 248 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-225ENST00000523950 RARGP13631 454 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 ATP5C1P36542 298 aaKnown RBP13.2□□□□□ -0.3
VEGFA-225ENST00000523950 GPD2P43304 727 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
VEGFA-225ENST00000523950 CLCN5P51795 746 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 GOLGA8FQ08AF8 430 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 GOLGA8DPQ0D2H9 430 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 ADIGQ0VDE8 80 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 SLC44A4Q53GD3 710 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 IRGQQ8WZA9 623 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 PCMTD1Q96MG8 357 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-225ENST00000523950 LRRC3BQ96PB8 259 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 NACA2Q9H009 215 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 RNF38Q9H0F5 515 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 LHX5Q9H2C1 402 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 C8orf33Q9H7E9 229 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-225ENST00000523950 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
VEGFA-225ENST00000523950 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.2□□□□□ -0.3
VEGFA-225ENST00000523950 NAGPAQ9UK23 515 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 CA14Q9ULX7 337 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 CCL26Q9Y258 94 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 CEP83Q9Y592 693 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 CPQQ9Y646 472 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
VEGFA-225ENST00000523950 A0A1B0GTH6 734 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 A0A1W2PQH9 124 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 LEFTY2O00292 366 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 TULP2O00295 520 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 MAN2B1O00754 1011 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-225ENST00000523950 SART1O43290 800 aaKnown RBP13.19□□□□□ -0.3
VEGFA-225ENST00000523950 CLCN1P35523 988 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 IFNAR2P48551 515 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 PMF1Q6P1K2 205 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 SCD5Q86SK9 330 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 ZNF677Q86XU0 584 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 FMNL3Q8IVF7 1028 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 SPAG5Q96R06 1193 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 NELL2Q99435 816 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 FAM83CQ9BQN1 747 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
VEGFA-225ENST00000523950 TRIM62Q9BVG3 475 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 OSBPL6Q9BZF3 934 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 ULBP1Q9BZM6 244 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 CCSER2Q9H7U1 834 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 FAM207AQ9NSI2 230 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-225ENST00000523950 OLA1Q9NTK5 396 aaKnown RBP13.19□□□□□ -0.3
VEGFA-225ENST00000523950 DNMT3LQ9UJW3 386 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 MRPS17Q9Y2R5 130 aaKnown RBP13.19□□□□□ -0.3
VEGFA-225ENST00000523950 KMT2EQ8IZD2 1858 aa13.19□□□□□ -0.3
VEGFA-225ENST00000523950 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 SERPINC1P01008 464 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 CYP11B1P15538 503 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 KRT9P35527 623 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 STAT1P42224 750 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 KLK7P49862 253 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 NUBP1P53384 320 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 JAM2P57087 298 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 SNX16P57768 344 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 DAOAP59103 153 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 POLR2FP61218 127 aaKnown RBP13.18□□□□□ -0.3
VEGFA-225ENST00000523950 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
VEGFA-225ENST00000523950 AMPD2Q01433 879 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 BTBD8Q5XKL5 378 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 DENND1BQ6P3S1 775 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 ZNF852Q6ZMS4 543 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 TPRG1Q6ZUI0 275 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 SLC47A2Q86VL8 602 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 RALGPS2Q86X27 583 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-225ENST00000523950 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 RIN3Q8TB24 985 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 ATP2A3Q93084 1043 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 OTUB2Q96DC9 234 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 TSPY26PQ9H489 355 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 TBC1D17Q9HA65 648 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms