RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 CLPTM1LQ96KA5 538 aa4.94□□□□□ -1.62
NSMCE2-211ENST00000523549 C1QTNF1Q9BXJ1 281 aa4.94□□□□□ -1.62
NSMCE2-211ENST00000523549 SIDT1Q9NXL6 827 aaKnown RBP4.94□□□□□ -1.62
NSMCE2-211ENST00000523549 SLC5A4Q9NY91 659 aa4.94□□□□□ -1.62
NSMCE2-211ENST00000523549 FLNBO75369 2602 aaKnown RBP4.94□□□□□ -1.62
NSMCE2-211ENST00000523549 TPRP12270 2363 aaKnown RBP4.94□□□□□ -1.62
NSMCE2-211ENST00000523549 ADGRB1O14514 1584 aa4.94□□□□□ -1.62
NSMCE2-211ENST00000523549 CARMIL3Q8ND23 1372 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 F2RL2O00254 374 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 PPP6CO00743 305 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 EBLN1P0CF75 366 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 SFPQP23246 707 aaKnown RBP eCLIP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 HMGB2P26583 209 aaKnown RBP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 MPGP29372 298 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 IARSP41252 1262 aaKnown RBP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 TOB1P50616 345 aaPredicted RBP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 SLC16A1P53985 500 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 FOXG1P55316 489 aaPredicted RBP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 TCF15Q12870 199 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 SLC4A8Q2Y0W8 1093 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 SLC9A4Q6AI14 798 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 TAF2Q6P1X5 1199 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 PGM2L1Q6PCE3 622 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 DDX42Q86XP3 938 aaKnown RBP eCLIP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 TBC1D5Q92609 795 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 ACTRT3Q9BYD9 372 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 TPSD1Q9BZJ3 242 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 NRIP3Q9NQ35 241 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 MRPS18AQ9NVS2 196 aaKnown RBP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 SRP68Q9UHB9 627 aaKnown RBP4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 KDM3BQ7LBC6 1761 aa4.93□□□□□ -1.62
NSMCE2-211ENST00000523549 NAV2Q8IVL1 2488 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 REV3LO60673 3130 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 NT5C1B-RDH14C9J2C7 533 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 NTN1O95631 604 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 TOP3BO95985 862 aaKnown RBP4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 RFC4P35249 363 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 HABP2Q14520 560 aaPredicted RBP4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 TBCCQ15814 346 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 LRIT3Q3SXY7 679 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 SUPT20HL1Q3ZLR7 823 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 CCDC93Q567U6 631 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 SLC18B1Q6NT16 456 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 PSD4Q8NDX1 1056 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 ZNF333Q96JL9 665 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 GPR35Q9HC97 309 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 ARHGEF3Q9NR81 526 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 RLIMQ9NVW2 624 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 MKS1Q9NXB0 559 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 COL4A5P29400 1685 aa4.92□□□□□ -1.62
NSMCE2-211ENST00000523549 CCDC154A6NI56 674 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PRRT4C9JH25 899 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PPEF2O14830 753 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 ADAMTS3O15072 1205 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PCDHGA12O60330 932 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 SOAT2O75908 522 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 MT-CO1P00395 513 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 TUBB4AP04350 444 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 MALP21145 153 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 CYP2C19P33261 490 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 DSC2Q02487 901 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 SNAPC2Q13487 334 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 RBM20Q5T481 1227 aaKnown RBP4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PRAMEF17Q5VTA0 474 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 ANKRD16Q6P6B7 361 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 CRELD2Q6UXH1 353 aaPredicted RBP4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 ZNF517Q6ZMY9 492 aaPredicted RBP4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 GPC2Q8N158 579 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 USP38Q8NB14 1042 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 NSUN6Q8TEA1 469 aaKnown RBP4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 DENND1AQ8TEH3 1009 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 ZNF622Q969S3 477 aaKnown RBP eCLIP4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 COA7Q96BR5 231 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 FAXDC2Q96IV6 333 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 CDX2Q99626 313 aaPredicted RBP4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 SH2D3AQ9BRG2 576 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 BRIP1Q9BX63 1249 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 SERHLQ9NQF3 203 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 AGAP1Q9UPQ3 857 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 ATP8A1Q9Y2Q0 1164 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PCDHGA9Q9Y5G4 932 aaKnown RBP4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PCDHGA8Q9Y5G5 932 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PCDHGA7Q9Y5G6 932 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PCDHGA6Q9Y5G7 932 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 PCDHGA3Q9Y5H0 932 aa4.91□□□□□ -1.62
NSMCE2-211ENST00000523549 ZSWIM8A7E2V4 1837 aa4.9□□□□□ -1.62
NSMCE2-211ENST00000523549 MAP1BP46821 2468 aaKnown RBP4.9□□□□□ -1.62
NSMCE2-211ENST00000523549 TJP1Q07157 1748 aa4.9□□□□□ -1.62
NSMCE2-211ENST00000523549 H0YIN7 160 aa4.9□□□□□ -1.63
NSMCE2-211ENST00000523549 CYP2D6P10635 497 aa4.9□□□□□ -1.63
NSMCE2-211ENST00000523549 KRT85P78386 507 aa4.9□□□□□ -1.63
NSMCE2-211ENST00000523549 ACAP2Q15057 778 aa4.9□□□□□ -1.63
NSMCE2-211ENST00000523549 KHDC1Q4VXA5 237 aaKnown RBP4.9□□□□□ -1.63
NSMCE2-211ENST00000523549 AARS2Q5JTZ9 985 aaKnown RBP4.9□□□□□ -1.63
NSMCE2-211ENST00000523549 PPP4R3AQ6IN85 833 aa4.9□□□□□ -1.63
NSMCE2-211ENST00000523549 USP50Q70EL3 339 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms