RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 YIPF1Q9Y548 306 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 COL4A6Q14031 1691 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 M0QYT0 321 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 SCAMP3O14828 347 aaKnown RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 CEP104O60308 925 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 RFPL2O75678 378 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 LRG1P02750 347 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 LTFP02788 710 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 C8AP07357 584 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 HMBSP08397 361 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 YWHAQP27348 245 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 DAOAP59103 153 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 KCTD19Q17RG1 926 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 EFHC1Q5JVL4 640 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 STK32AQ8WU08 396 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 RNF139Q8WU17 664 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 SLC22A17Q8WUG5 538 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 TIFAQ96CG3 184 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 MCRS1Q96EZ8 462 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 FAM204AQ9H8W3 233 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 GMIPQ9P107 970 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 SAR1BQ9Y6B6 198 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 A0A1W2PQH9 124 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 MDM4O15151 490 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 CCL16O15467 120 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 VNN2O95498 520 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 HAPLN1P10915 354 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 ATF6P18850 670 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 PGFP49763 221 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 AADACL2Q6P093 401 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 RNF168Q8IYW5 571 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 MRPL43Q8N983 215 aaKnown RBP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 KREMEN2Q8NCW0 462 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 MS4A14Q96JA4 679 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 SLITRK1Q96PX8 696 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TRPC7Q9HCX4 862 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 CNGB3Q9NQW8 809 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 KCND1Q9NSA2 647 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 DDIT4Q9NX09 232 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 PTPRSQ13332 1948 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 CARNS1A5YM72 827 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 C2orf71A6NGG8 1288 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 HSF2BPO75031 334 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 PROSCO94903 275 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TBX18O95935 607 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 MOCS2O96007 188 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 GGCXP38435 758 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 RAB30Q15771 203 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 PPP6R3Q5H9R7 873 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 KAZNQ674X7 775 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 NT5DC3Q86UY8 548 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 LRRC57Q8N9N7 239 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 COG1Q8WTW3 980 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 RNF25Q96BH1 459 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 KLHL5Q96PQ7 755 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TLR10Q9BXR5 811 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 POPDC2Q9HBU9 364 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 CSNK1G1Q9HCP0 422 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 GPATCH2LQ9NWQ4 482 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 SFMBT1Q9UHJ3 866 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 HHLA1C9JL84 531 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 MSI1O43347 362 aaKnown RBP9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TBC1D4O60343 1298 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 EPCAMP16422 314 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 GJA1P17302 382 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 GABRB2P47870 512 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TAS2R40P59535 323 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 ZNF252P-AS1Q0IIN9 211 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TRNP1Q6NT89 227 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 UBL4BQ8N7F7 174 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 SLITRK6Q9H5Y7 841 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TLE6Q9H808 572 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 SSX2IPQ9Y2D8 614 aa9.78□□□□□ -0.84
SDCBP-212ENST00000523483 TRANK1O15050 2925 aa9.77□□□□□ -0.84
SDCBP-212ENST00000523483 LRRD1A4D1F6 860 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 PRPSAP2O60256 369 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 NRIP1P48552 1158 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 EPHB3P54753 998 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 YWHAGP61981 247 aaKnown RBP eCLIP9.77□□□□□ -0.85
SDCBP-212ENST00000523483 MLLT1Q03111 559 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-212ENST00000523483 EFEMP1Q12805 493 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 RAB33AQ14088 237 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 C10orf120Q5SQS8 335 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 TXNRD3NBQ6F5E7 133 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 ZNF662Q6ZS27 426 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 SLC26A9Q7LBE3 791 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 KCTD13Q8WZ19 329 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 TBCBQ99426 244 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 CORO1BQ9BR76 489 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 PLVAPQ9BX97 442 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 HEMGNQ9BXL5 484 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 CALN1Q9BXU9 219 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 PLEKHA4Q9H4M7 779 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 NMUR1Q9HB89 426 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 ASNSD1Q9NWL6 643 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 STAP1Q9ULZ2 295 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 INSL5Q9Y5Q6 135 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms