RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ARHGEF4Q9NR80 690 aa9.56□□□□□ -0.88
TRAPPC9-212ENST00000521944 ABI2Q9NYB9 513 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC9-212ENST00000521944 ARHGAP28Q9P2N2 729 aa9.56□□□□□ -0.88
TRAPPC9-212ENST00000521944 AK5Q9Y6K8 562 aa9.56□□□□□ -0.88
TRAPPC9-212ENST00000521944 A0A1B0GVT2 93 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 LEFTY2O00292 366 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 KCNK3O14649 394 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 BRINP1O60477 761 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 DTNBO60941 627 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 ZNF217O75362 1048 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 CER1O95813 267 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 APODP05090 189 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 CKMP06732 381 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 HARSP12081 509 aaKnown RBP9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 JUPP14923 745 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 HDCP19113 662 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 EIF2DP41214 584 aaKnown RBP9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 ATP2C1P98194 919 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 PPP2R5AQ15172 486 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 ECM1Q16610 540 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 CCDC142Q17RM4 750 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 KIF19Q2TAC6 998 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 KCNT1Q5JUK3 1230 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 WDR45BQ5MNZ6 344 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 SYCP2LQ5T4T6 812 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 ETFBKMTQ8IXQ9 262 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 SPPL2BQ8TCT7 592 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 IPO4Q8TEX9 1081 aaKnown RBP9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 TNFRSF25Q93038 417 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 TRMT2BQ96GJ1 504 aaKnown RBP9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 TMEM176AQ96HP8 235 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 MRGPRX1Q96LB2 322 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 ARID3AQ99856 593 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 TCHPQ9BT92 498 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 MRPL4Q9BYD3 311 aaKnown RBP9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 NRSN2Q9GZP1 204 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 RNF38Q9H0F5 515 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 ANKMY1Q9P2S6 941 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 NFE2L3Q9Y4A8 694 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 POLQO75417 2590 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 FBN2P35556 2912 aa9.55□□□□□ -0.88
TRAPPC9-212ENST00000521944 TMEM131Q92545 1883 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 LACTBL1A8MY62 500 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 KCNJ18B7U540 433 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 CBX4O00257 560 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 PIRO00625 290 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 TERTO14746 1132 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 BCAT2O15382 392 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 KRT38O76015 456 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 DEXIO95424 95 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 BAG4O95429 457 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 CSH1P0DML2 217 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 CSH2P0DML3 217 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 ODC1P11926 461 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 BMP2P12643 396 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 HOXB2P14652 356 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 CYP2F1P24903 491 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 ADSSP30520 456 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 TNFSF9P41273 254 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 TXKP42681 527 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 CSNK1EP49674 416 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 SSRP1Q08945 709 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 PREPLQ4J6C6 727 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 C6orf118Q5T5N4 469 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 ARHGAP40Q5TG30 622 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 EGFLAMQ63HQ2 1017 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 WSCD1Q658N2 575 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 ZNF513Q8N8E2 541 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 C2orf15Q8WU43 125 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 SNRNP27Q8WVK2 155 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 MED8Q96G25 268 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 TOE1Q96GM8 510 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 TMEM60Q9H2L4 133 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 PLEKHA5Q9HAU0 1116 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 WSB2Q9NYS7 404 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 UBQLN1Q9UMX0 589 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 PHLPP2Q6ZVD8 1323 aa9.54□□□□□ -0.88
TRAPPC9-212ENST00000521944 ICE1Q9Y2F5 2266 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 LRBAP50851 2863 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 ANO9A1A5B4 782 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 TBC1D3BA6NDS4 549 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 CCDC169A6NNP5 214 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 FAM189A1O60320 539 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 PCDHGA12O60330 932 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 NDUFS2O75306 463 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 PRPF40AO75400 957 aaKnown RBP9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 ADRB2P07550 413 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 NTSR1P30989 418 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 PEX3P56589 373 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 RESTQ13127 1097 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 CALCRLQ16602 461 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 TBC1D25Q3MII6 688 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 SPATA1Q5VX52 437 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 C9orf57Q5W0N0 161 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 FBXL19Q6PCT2 694 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 IL27RAQ6UWB1 636 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 FAM177A1Q8N128 213 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms