RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 PCDHB5Q9Y5E4 795 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 PCDHB4Q9Y5E5 795 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 FHOD1Q9Y613 1164 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 COL6A3P12111 3177 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 A0A1W2PQJ5 194 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 F8VZ95 297 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 SEC24AO95486 1093 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 SPATA31D3P0C874 917 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 VDRP11473 427 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 HOXB8P17481 243 aaPredicted RBP8.85□□□□□ -0.99
VPS13B-210ENST00000521932 WEE1P30291 646 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 HOXA9P31269 272 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 ELF1P32519 619 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 LTBRP36941 435 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 SCNN1AP37088 669 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 MAGEA11P43364 429 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 TUFMP49411 452 aaKnown RBP8.85□□□□□ -0.99
VPS13B-210ENST00000521932 POLR2FP61218 127 aaKnown RBP8.85□□□□□ -0.99
VPS13B-210ENST00000521932 PSMC1P62191 440 aaKnown RBP8.85□□□□□ -0.99
VPS13B-210ENST00000521932 DUSP4Q13115 394 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 ARHGAP44Q17R89 818 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 ARHGAP17Q68EM7 881 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 ELMSAN1Q6PJG2 1045 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 VSTM1Q6UX27 236 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 C4orf50Q6ZRC1 276 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 SPATA31D4Q6ZUB0 917 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 CCDC149Q6ZUS6 474 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 SPATA2LQ8IUW3 424 aaPredicted RBP8.85□□□□□ -0.99
VPS13B-210ENST00000521932 FUKQ8N0W3 1084 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 ATAD1Q8NBU5 361 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 CYFIP2Q96F07 1278 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 CEP295NLQ96MC4 621 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 HEXIM2Q96MH2 286 aaKnown RBP8.85□□□□□ -0.99
VPS13B-210ENST00000521932 PGLYRP2Q96PD5 576 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 LPIN3Q9BQK8 851 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 B3GNT5Q9BYG0 378 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 RHOBTB2Q9BYZ6 727 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 TRIM5Q9C035 493 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 CSNK1G1Q9HCP0 422 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 ZDHHC7Q9NXF8 308 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 CLEC1BQ9P126 229 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 MYO6Q9UM54 1294 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 MYO9BQ13459 2157 aa8.85□□□□□ -0.99
VPS13B-210ENST00000521932 PRRC2BQ5JSZ5 2229 aaKnown RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 LINC01565O15544 149 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 C8AP07357 584 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 POU2F2P09086 479 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 SRGAP2BP0DMP2 458 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 HAPLN1P10915 354 aaPredicted RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 BDNFP23560 247 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CYP2F1P24903 491 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 STAT1P42224 750 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 BPIFB4P59827 614 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 RBM10P98175 930 aaKnown RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CYP27A1Q02318 531 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 DLX2Q07687 328 aaPredicted RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 SPEM2Q0P670 501 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 ORC1Q13415 861 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 RAPGEF1Q13905 1077 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 STILQ15468 1287 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CNGA2Q16280 664 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 PTPN21Q16825 1174 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CCDC142Q17RM4 750 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 SGO2Q562F6 1265 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 MDH1BQ5I0G3 518 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 SPECC1LQ69YQ0 1117 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 ANKRD54Q6NXT1 300 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 LLGL2Q6P1M3 1020 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CYP26C1Q6V0L0 522 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 BTLAQ7Z6A9 289 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 VSTM4Q8IW00 320 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 RBBP8NLQ8NC74 664 aaPredicted RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CMASQ8NFW8 434 aaPredicted RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 PRUNE2Q8WUY3 3088 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 ZNF606Q8WXB4 792 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 TFAP2BQ92481 460 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 MYLPFQ96A32 169 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 MRFAP1L1Q96HT8 127 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 MSLNLQ96KJ4 702 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 ZSWIM1Q9BR11 485 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 S1PR5Q9H228 398 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CYP4F11Q9HBI6 524 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 NLRC4Q9NPP4 1024 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 MAN1C1Q9NR34 630 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 DZANK1Q9NVP4 752 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 ABI2Q9NYB9 513 aaPredicted RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 AIPL1Q9NZN9 384 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 EGFL7Q9UHF1 273 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 DMGDHQ9UI17 866 aaKnown RBP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 CAPN11Q9UMQ6 739 aa8.84□□□□□ -0.99
VPS13B-210ENST00000521932 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.84□□□□□ -0.99
VPS13B-210ENST00000521932 MYO7AQ13402 2215 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 CCDC195A0A1B0GUA6 201 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 O00370 1275 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 PRRG1O14668 218 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 CYP26A1O43174 497 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 RFPL2O75678 378 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 PROCP04070 461 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 HNRNPA1P09651 372 aaKnown RBP eCLIP8.83□□□□□ -1
VPS13B-210ENST00000521932 KRT5P13647 590 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms